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temporarily deferred "use textConnection to pass tsv to R"
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@ -3,42 +3,13 @@
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#+SEQ_TODO: TODO OPEN PROPOSED | DONE DEFERRED REJECTED
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#+STARTUP: oddeven
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* Tasks [10/20]
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* Tasks [11/20]
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** TODO results-type header (scalar/vector)
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In response to a point in Dan's email. We should allow the user to
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force scalar or vector results. This could be done with a header
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argument, and the default behavior could be controlled through a
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configuration variable.
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** TODO use textConnection to pass tsv to R?
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When passing args from the org buffer to R, the following route is
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used: arg in buffer -> elisp -> tsv on file -> data frame in R. I
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think it would be possible to avoid having to write to file by
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constructing an R expression in litorgy-R-assign-elisp, something
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like this
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#+begin_src emacs-lisp
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(litorgy-R-input-command
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(format "%s <- read.table(textConnection(\"%s\"), sep=\"\\t\", as.is=TRUE)"
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name (orgtbl-to-tsv value '(:sep "\t" :fmt litorgy-R-quote-tsv-field))))
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#+end_src
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I haven't tried to implement this yet as it's basically just
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fiddling with something that works. The only reason for it I can
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think of would be efficiency and I haven't tested that.
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[Eric] Sounds like a good idea, I'll bump this up to TODO. Didn't
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work after an initial test, but still worth trying.
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for quick tests
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#+tblname: quick-test
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| 1 | 2 | 3 |
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#+begin_src R :var vec=quick-test
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mean(mean(vec))
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#+end_src
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** TODO re-implement R evaluation using ess-command or ess-execute
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I don't have any complaints with the current R evaluation code or
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behaviour, but I think it would be good to use the ESS functions
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@ -198,6 +169,38 @@ one that comes to mind is the ability to treat a source-code block
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like a function which accepts arguments and returns results. Actually
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this can be it's own TODO (see [[* source blocks as functions][source blocks as functions]]).
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** DEFERRED use textConnection to pass tsv to R?
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When passing args from the org buffer to R, the following route is
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used: arg in buffer -> elisp -> tsv on file -> data frame in R. I
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think it would be possible to avoid having to write to file by
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constructing an R expression in litorgy-R-assign-elisp, something
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like this
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#+begin_src emacs-lisp
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(litorgy-R-input-command
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(format "%s <- read.table(textConnection(\"%s\"), sep=\"\\t\", as.is=TRUE)"
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name (orgtbl-to-tsv value '(:sep "\t" :fmt litorgy-R-quote-tsv-field))))
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#+end_src
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I haven't tried to implement this yet as it's basically just
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fiddling with something that works. The only reason for it I can
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think of would be efficiency and I haven't tested that.
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This Didn't work after an initial test. I still think this is a
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good idea (I also think we should try to do something similar when
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writing out results frmo R to elisp) however as it wouldn't result
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in any functional changes I'm bumping it down to deferred for
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now. [Eric]
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for quick tests
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#+tblname: quick-test
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| 1 | 2 | 3 |
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#+begin_src R :var vec=quick-test
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mean(mean(vec))
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#+end_src
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** DONE litorgy tests litorgy [1/1]
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since we are accumulating this nice collection of source-code blocks
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in the sandbox section we should make use of them as unit tests.
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