Backport commit b5e3cc3bc from Emacs

* lisp/ob-julia.el: Use lexical-binding.
(ess-eval-visibly-p): Declare.
(org-babel-julia-assign-elisp): Remove unused vars `header` and
`row-names` and corespondingly remove now unused args `colnames-p` and
`rownames-p`.
(org-babel-variable-assignments:julia): Adjust call to
`org-babel-julia-assign-elisp` accordingly.
(org-babel-julia-initiate-session): Use `bound-and-true-p`.
(org-babel-julia-evaluate-external-process)
(org-babel-julia-evaluate-session, org-babel-julia-evaluate):
Remove unused arg `row-names-p`.
(org-babel-execute:julia): Adjust call to
`org-babel-julia-evaluate` accordingly.

* lisp/org/ob-julia.el: Use lexical-binding
b5e3cc3bc597d56dfe09ee500717344649ea0354
Stefan Monnier
Thu Sep 30 10:02:29 2021 -0400

[ km: This was independently applied covered on the bugfix branch with
  the combination of a3b6728f9 and efa498b67.  I'm applying it here
  too for bookkeeping/traceability purposes, and to bring in one
  missing piece (see merge). ]
This commit is contained in:
Stefan Monnier 2021-09-30 10:02:29 -04:00 committed by Kyle Meyer
parent 15b09c1680
commit 7325cf186a
1 changed files with 38 additions and 29 deletions

View File

@ -1,4 +1,4 @@
;;; ob-julia.el --- org-babel functions for julia code evaluation ;;; ob-julia.el --- org-babel functions for julia code evaluation -*- lexical-binding: t; -*-
;; Copyright (C) 2013-2021 Free Software Foundation, Inc. ;; Copyright (C) 2013-2021 Free Software Foundation, Inc.
;; Authors: G. Jay Kerns, based on ob-R.el by Eric Schulte and Dan Davison ;; Authors: G. Jay Kerns, based on ob-R.el by Eric Schulte and Dan Davison
@ -44,7 +44,7 @@
(raw org html latex code pp wrap) (raw org html latex code pp wrap)
(replace silent append prepend) (replace silent append prepend)
(output value graphics)))) (output value graphics))))
"julia-specific header arguments.") "Julia-specific header arguments.")
(add-to-list 'org-babel-tangle-lang-exts '("julia" . "jl")) (add-to-list 'org-babel-tangle-lang-exts '("julia" . "jl"))
@ -58,7 +58,8 @@
:type 'string) :type 'string)
(defvar ess-current-process-name) ; dynamically scoped (defvar ess-current-process-name) ; dynamically scoped
(defvar ess-local-process-name) ; dynamically scoped (defvar ess-local-process-name) ; dynamically scoped
(defvar ess-eval-visibly-p) ; dynamically scoped
(defun org-babel-edit-prep:julia (info) (defun org-babel-edit-prep:julia (info)
(let ((session (cdr (assq :session (nth 2 info))))) (let ((session (cdr (assq :session (nth 2 info)))))
(when (and session (when (and session
@ -68,7 +69,7 @@
(defun org-babel-expand-body:julia (body params &optional _graphics-file) (defun org-babel-expand-body:julia (body params &optional _graphics-file)
"Expand BODY according to PARAMS, return the expanded body." "Expand BODY according to PARAMS, return the expanded body."
(mapconcat 'identity (mapconcat #'identity
(append (append
(when (cdr (assq :prologue params)) (when (cdr (assq :prologue params))
(list (cdr (assq :prologue params)))) (list (cdr (assq :prologue params))))
@ -89,7 +90,7 @@ This function is called by `org-babel-execute-src-block'."
(graphics-file (and (member "graphics" (assq :result-params params)) (graphics-file (and (member "graphics" (assq :result-params params))
(org-babel-graphical-output-file params))) (org-babel-graphical-output-file params)))
(colnames-p (unless graphics-file (cdr (assq :colnames params)))) (colnames-p (unless graphics-file (cdr (assq :colnames params))))
(rownames-p (unless graphics-file (cdr (assq :rownames params)))) ;; (rownames-p (unless graphics-file (cdr (assq :rownames params))))
(full-body (org-babel-expand-body:julia body params graphics-file)) (full-body (org-babel-expand-body:julia body params graphics-file))
(result (result
(org-babel-julia-evaluate (org-babel-julia-evaluate
@ -97,9 +98,10 @@ This function is called by `org-babel-execute-src-block'."
(or (equal "yes" colnames-p) (or (equal "yes" colnames-p)
(org-babel-pick-name (org-babel-pick-name
(cdr (assq :colname-names params)) colnames-p)) (cdr (assq :colname-names params)) colnames-p))
(or (equal "yes" rownames-p) ;; (or (equal "yes" rownames-p)
(org-babel-pick-name ;; (org-babel-pick-name
(cdr (assq :rowname-names params)) rownames-p))))) ;; (cdr (assq :rowname-names params)) rownames-p))
)))
(if graphics-file nil result)))) (if graphics-file nil result))))
(defun org-babel-normalize-newline (result) (defun org-babel-normalize-newline (result)
@ -136,8 +138,9 @@ This function is called by `org-babel-execute-src-block'."
(lambda (pair) (lambda (pair)
(org-babel-julia-assign-elisp (org-babel-julia-assign-elisp
(car pair) (cdr pair) (car pair) (cdr pair)
(equal "yes" (cdr (assq :colnames params))) ;; (equal "yes" (cdr (assq :colnames params)))
(equal "yes" (cdr (assq :rownames params))))) ;; (equal "yes" (cdr (assq :rownames params)))
))
(mapcar (mapcar
(lambda (i) (lambda (i)
(cons (car (nth i vars)) (cons (car (nth i vars))
@ -150,21 +153,22 @@ This function is called by `org-babel-execute-src-block'."
(defun org-babel-julia-quote-csv-field (s) (defun org-babel-julia-quote-csv-field (s)
"Quote field S for export to julia." "Quote field S for export to julia."
(if (stringp s) (if (stringp s)
(concat "\"" (mapconcat 'identity (split-string s "\"") "\"\"") "\"") (concat "\"" (mapconcat #'identity (split-string s "\"") "\"\"") "\"")
(format "%S" s))) (format "%S" s)))
(defun org-babel-julia-assign-elisp (name value colnames-p rownames-p) (defun org-babel-julia-assign-elisp (name value) ;; colnames-p rownames-p
"Construct julia code assigning the elisp VALUE to a variable named NAME." "Construct julia code assigning the elisp VALUE to a variable named NAME."
(if (listp value) (if (listp value)
(let* ((lengths (mapcar 'length (cl-remove-if-not 'sequencep value))) (let* ((lengths (mapcar #'length (cl-remove-if-not #'sequencep value)))
(max (if lengths (apply 'max lengths) 0)) (max (if lengths (apply #'max lengths) 0))
(min (if lengths (apply 'min lengths) 0))) (min (if lengths (apply #'min lengths) 0)))
;; Ensure VALUE has an orgtbl structure (depth of at least 2). ;; Ensure VALUE has an orgtbl structure (depth of at least 2).
(unless (listp (car value)) (setq value (list value))) (unless (listp (car value)) (setq value (list value)))
(let ((file (orgtbl-to-csv value '(:fmt org-babel-julia-quote-csv-field))) (let ((file (orgtbl-to-csv value '(:fmt org-babel-julia-quote-csv-field)))
(header (if (or (eq (nth 1 value) 'hline) colnames-p) ;; (header (if (or (eq (nth 1 value) 'hline) colnames-p)
"TRUE" "FALSE")) ;; "TRUE" "FALSE"))
(row-names (if rownames-p "1" "NULL"))) ;; (row-names (if rownames-p "1" "NULL"))
)
(if (= max min) (if (= max min)
(format "%s = begin (format "%s = begin
using CSV using CSV
@ -183,11 +187,15 @@ end"
(unless (string= session "none") (unless (string= session "none")
(let ((session (or session "*Julia*")) (let ((session (or session "*Julia*"))
(ess-ask-for-ess-directory (ess-ask-for-ess-directory
(and (boundp 'ess-ask-for-ess-directory) (and (bound-and-true-p ess-ask-for-ess-directory)
ess-ask-for-ess-directory
(not (cdr (assq :dir params)))))) (not (cdr (assq :dir params))))))
(if (org-babel-comint-buffer-livep session) (if (org-babel-comint-buffer-livep session)
session session
;; FIXME: Depending on `display-buffer-alist', (julia) may end up
;; popping up a new frame which `save-window-excursion' won't be able
;; to "undo", so we really should call a kind of
;; `julia-no-select' instead so we don't need to undo any
;; window-changes afterwards.
(save-window-excursion (save-window-excursion
(when (get-buffer session) (when (get-buffer session)
;; Session buffer exists, but with dead process ;; Session buffer exists, but with dead process
@ -251,16 +259,16 @@ end"
end") end")
(defun org-babel-julia-evaluate (defun org-babel-julia-evaluate
(session body result-type result-params column-names-p row-names-p) (session body result-type result-params column-names-p) ;; row-names-p
"Evaluate julia code in BODY." "Evaluate julia code in BODY."
(if session (if session
(org-babel-julia-evaluate-session (org-babel-julia-evaluate-session
session body result-type result-params column-names-p row-names-p) session body result-type result-params column-names-p) ;; row-names-p
(org-babel-julia-evaluate-external-process (org-babel-julia-evaluate-external-process
body result-type result-params column-names-p row-names-p))) body result-type result-params column-names-p))) ;; row-names-p
(defun org-babel-julia-evaluate-external-process (defun org-babel-julia-evaluate-external-process
(body result-type result-params column-names-p row-names-p) (body result-type result-params column-names-p) ;; row-names-p
"Evaluate BODY in external julia process. "Evaluate BODY in external julia process.
If RESULT-TYPE equals 'output then return standard output as a If RESULT-TYPE equals 'output then return standard output as a
string. If RESULT-TYPE equals 'value then return the value of the string. If RESULT-TYPE equals 'value then return the value of the
@ -284,7 +292,7 @@ last statement in BODY, as elisp."
(output (org-babel-eval org-babel-julia-command body)))) (output (org-babel-eval org-babel-julia-command body))))
(defun org-babel-julia-evaluate-session (defun org-babel-julia-evaluate-session
(session body result-type result-params column-names-p row-names-p) (session body result-type result-params column-names-p) ;; row-names-p
"Evaluate BODY in SESSION. "Evaluate BODY in SESSION.
If RESULT-TYPE equals 'output then return standard output as a If RESULT-TYPE equals 'output then return standard output as a
string. If RESULT-TYPE equals 'value then return the value of the string. If RESULT-TYPE equals 'value then return the value of the
@ -314,7 +322,7 @@ last statement in BODY, as elisp."
column-names-p))) column-names-p)))
(output (output
(mapconcat (mapconcat
'org-babel-chomp #'org-babel-chomp
(butlast (butlast
(delq nil (delq nil
(mapcar (mapcar
@ -327,13 +335,14 @@ last statement in BODY, as elisp."
(substring line (match-end 1)) (substring line (match-end 1))
line)) line))
(org-babel-comint-with-output (session org-babel-julia-eoe-output) (org-babel-comint-with-output (session org-babel-julia-eoe-output)
(insert (mapconcat 'org-babel-chomp (insert (mapconcat #'org-babel-chomp
(list body org-babel-julia-eoe-indicator) (list body org-babel-julia-eoe-indicator)
"\n")) "\n"))
(inferior-ess-send-input)))))) "\n")))) (inferior-ess-send-input))))))
"\n"))))
(defun org-babel-julia-process-value-result (result column-names-p) (defun org-babel-julia-process-value-result (result column-names-p)
"julia-specific processing of return value. "Julia-specific processing of return value.
Insert hline if column names in output have been requested." Insert hline if column names in output have been requested."
(if column-names-p (if column-names-p
(cons (car result) (cons 'hline (cdr result))) (cons (car result) (cons 'hline (cdr result)))