Commit Graph

91 Commits

Author SHA1 Message Date
Thierry Banel 54ab0e1c60 Babel C, C++, D support for non-homogeneous input tables
* ob-C.el: handling of non-homogeneous tables,
        support for table header,
        support for iterating over table cells.
        (org-babel-expand-body:C++): uncomment
        (org-babel-C-execute): cosmetic changes
        (org-babel-C-expand-C): add support for table columns names,
        add support for table dimensions,
        add standard includes
        (org-babel-C-val-to-C-type): rewrite to support non-homogeneous
        tables cells
        (org-babel-C-table-sizes-to-C): new function to gain access
        to the table dimensions
        (org-babel-C-utility-header-to-C):
        (org-babel-C-header-to-C): new functions to generate
        support for table header.

        * ob-C-test.org: added D sibling tests similar to C++,
        added non-homogeneous table example for C++ and D

        * test-ob-C.el: new tests for D and non-homogeneous tables
        (ob-C/simple-program):
        (ob-C/simple-program):
        (ob-D/simple-program):
        (ob-C/integer-var):
        (ob-D/integer-var):
        (ob-C/two-integer-var):
        (ob-D/two-integer-var):
        (ob-C/string-var):
        (ob-D/string-var):
        (ob-C/preprocessor):
        (ob-C/table):
        (ob-D/table):
        (ob-C/list-var):
        (ob-D/list-var):
        (ob-C/vector-var):
        (ob-D/vector-var):
        (ob-C/list-list-var):
        (ob-D/list-list-var):
        (ob-C/inhomogeneous_table):
        (ob-D/inhomogeneous_table): add compiler availability check
        (ob-D/simple-program):
        (ob-D/integer-var):
        (ob-D/two-integer-var):
        (ob-D/string-var):
        (ob-D/table):
        (ob-D/list-var):
        (ob-D/vector-var):
        (ob-D/list-list-var):
        (ob-D/inhomogeneous_table): add D unit tests
        (ob-C/inhomogeneous_table):
        (ob-D/inhomogeneous_table): add non-homogeneous table
        unit tests
2014-06-08 19:20:16 -04:00
Achim Gratz 4ed554196b ox: implement additional #+INCLUDE markup
* lisp/ox.el (org-export-expand-include-keyword): Change parsing so
  that arbitrary blocks around the included content can be used.
  Content is not code-escaped unless it is a literal block, this
  applies to "src" and "example".
* doc/org.texi (Include files): Document the additional markup.
* testing/lisp/test-ox.el (test-org-export/expand-include): Add test
  for an #+INCLUDE with "html" and "center" markup.
* testing/examples/include.html: New file, used for testing
  "#+INCLUDE html".
2014-06-07 18:02:52 +02:00
Eric Schulte c3e497f394 awk code blocks handle tabular input
Protected by a new unit test.

* lisp/ob-awk.el (org-babel-execute:awk): Use the
  `org-babel-awk-var-to-awk' function instead of a simple format
  string.
2014-06-07 11:16:55 -04:00
Aaron Ecay 08e2596718 ob-core.el: allow the auto-generation of output file names for src blocks.
* lisp/ob-core.el (org-babel-generate-file-param): New function.
(org-babel-get-src-block-info): Use it.
(org-babel-merge-params): Handle :file-ext.
(org-babel-graphical-output-file): error if no :file or :file-ext.
* testing/lisp/test-ob.el (test-org-babel/file-ext-and-output-dir):
New test.
* doc/org.texi (Specific header arguments): Add doc for :file-ext and
:output-dir header args.
* lisp/ob-R.el (org-babel-expand-body:R): Don’t calculate
graphics-file.
(org-babel-execute:R): Only look for a graphics-file if needed.
2014-05-11 16:33:22 -04:00
Pascal Fleury 3c7e75ab0b ob-shell.el: export vars as arrays for 'sh' code blocks
* lisp/ob-shell.el: added support to serialize vars as arrays or associative arrays as appropriate if it is using bash.
* testing/examples/ob-shell-test.org: a file containing a few code blocks both illustrating the use of arrays as well as serving as test for the new export functionality.
* testing/lisp/test-ob-shell.el: added a few unit tests that verify that this new logic only triggers for bash and no other shell at this time.

When variables are defined in a 'sh' code block, they are exported as strings. when the variable itself is an array or a table, then we simply get a shell variable that contains the list of all values in a non-structured form.
When calling the code block with bash, however, it will now export the list as an array, the table as an associative array. A scalar is exported the same way as before.

Signed-off-by: Pascal Fleury <fleury@google.com>
2014-04-14 21:24:00 -06:00
Nicolas Goaziou fc9ce86cfc Rewrite `org-open-at-point' using Elements
* lisp/org.el (org-open-at-point): Rewrite function using Element
  parser.
(org-link-types): Add "help" type.
* testing/lisp/test-org-open-at-point.el: Remove file.  Two tests are
  not supported anymore (namely bracket-link-before and
  plain-link-before) and the other tests are wrong (mixing id and
  custom-id links).
* testing/examples/open-at-point.org: Remove file.
* testing/lisp/test-org.el (test-org/custom-id): Add test.

Unlike to the previous implementation, this one will only open links
under point or just before point, not links on the same line but
before point.
2014-02-23 14:26:18 +01:00
Michael Brand 77710ec262 Babel: add comments to ERT for reading properties
* testing/examples/babel.org (use case of reading entry properties):
Add comments to function definitions.
2013-11-15 19:20:25 +01:00
Michael Brand f7e6f1589d Babel: use NAME for src block calls in ERT
* testing/examples/babel.org(use case of reading entry properties):
Adapt to use the new introduced #+NAME for src block calls.
* testing/lisp/test-ob-exp.el(ob-exp/use-case-of-reading-entry-properties):
Adapt to use the new introduced #+NAME for src block calls.
2013-07-01 08:10:11 -06:00
Michael Brand b01871f23e Babel: use case of reading entry properties as an ERT
* testing/examples/babel.org: Add test entry for ERT.
* testing/lisp/test-ob-exp.el(ob-exp/use-case-of-reading-entry-properties):
Add expected source block results for ERT.
2013-06-26 11:09:21 -06:00
Achim Gratz 36d9a7a4e3 testing: provide tests for header-args[:lang] properties 2013-06-23 19:35:15 +02:00
Achim Gratz e23bd6df8a testing/examples/babel.org: quote :shebang
* testing/examples/babel.org: Quote :shebang header argument.

2a73e06 introduced a new behaviour for org-babel-read and values
starting with "#" must now be quoted.
2013-06-08 22:06:57 +02:00
Rüdiger Sonderfeld cdfcc064d2 ob-C: Add list support.
* lisp/ob-C.el (org-babel-C-var-to-C): Add list support
(org-babel-C-val-to-C-list-type, org-babel-C-val-to-C-type,
org-babel-C-format-val): New functions.
(org-babel-C-ensure-main-wrap, org-babel-execute:C,
org-babel-execute:C++, rg-babel-execute:cpp, org-babel-C++-compiler,
org-babel-C-compiler): Improve docstring.
* testing/examples/ob-C-test.org (string_var): Add required std::
(Array): Add missing ID.
(Matrix): Add tests for list support.
* testing/lisp/test-ob-C.el (ob-C/table): Test succeeds.
(ob-C/list-var, ob-C/vector-var, ob-C/list-list-var): Add tests for
list support.

Signed-off-by: Rüdiger Sonderfeld <ruediger@c-plusplus.de>
2013-06-06 12:06:26 -06:00
Litvinov Sergey d7e884d86c Add a matrix input to ob-fortran.el
* lisp/ob-fortran.el: add a branch which handles nested lists
* testing/examples/ob-fortran-test.org: add a test for matrix input
* testing/lisp/test-ob-fortran.el: add a test for matrix input
2013-06-03 22:56:23 -06:00
Eric Schulte 86ce0790a1 change this failing test so that it no longer fails
I see no good way to get the code block name, not sure how we used to do
this, but it is definitely not supported by the current code.
2013-04-03 11:30:14 -06:00
Nicolas Goaziou 7736c2d7fb ox: Handle BIND keywords in SETUPFILE files
* lisp/ox.el (org-export-get-environment): Update comment.
(org-export--install-letbind-maybe): Go into SETUPFILE files and
handle BIND keywords there.
* testing/examples/setupfile.org: Update test file.
* testing/lisp/test-ox.el: Add tests.
2013-03-29 21:51:57 +01:00
Samuel Loury 0c82deb421 Test the org-open-at-point function.
* testing/examples/open-at-point.org: new file.
* testing/lisp/test-org-open-at-point.el: new file.

This tests only the function when inside or before bracket links
and plain links.
2013-03-16 20:27:00 +01:00
Nicolas Goaziou 677433d9b4 ox: Fix bug where properties read from setupfile overwrite previous properties
* lisp/ox.el (org-export--get-inbuffer-options): Remove an optional
  argument.  Rewrite function.  Properties read from a setupfile do
  not overwrite anymore previously computed properties.
(org-export-get-environment): Apply changes to previous function.
* lisp/org.el (org-create-formula--latex-header): Apply arity change
  from `org-export--get-inbuffer-options'.
* testing/lisp/test-ox.el: Add test.
* testing/examples/setupfile.org: New file.
2013-02-26 23:35:36 +01:00
Nicolas Goaziou 346c978939 Remove useless data in test file
* testing/examples/macro-templates.org: Remove time-stamp.
2012-10-10 22:46:50 +02:00
Nicolas Goaziou 89d6a26f8d org-export: Expand include keywords before macros
* contrib/lisp/org-export.el (org-export-as): Expand include keywords
  before macros.  This allows to specify macro templates in the
  included file.
* testing/examples/macro-templates.org: New file for testing purposes.
* testing/lisp/test-org-export.el: Add test.
2012-10-10 13:52:54 +02:00
Bastien Guerry 00e5c278fd testing/: Update two tests
The current Emacs trunk bumped to version >24.2.50 because a new
release Emacs 24.2 has been decided.  `cl-map' is not an alias for
`map' in Emacs < 24.2.50 -- so take this into account in some tests.
2012-08-20 14:24:14 +02:00
Eric Schulte 16b2af9fdb passing all tests 2012-08-10 10:56:14 -06:00
Bastien Guerry 6c911234ac Remove files coming from maint. 2012-03-20 01:50:59 +01:00
Bastien Guerry df82832fb7 Merge maint fixup and finish master fixup 2012-03-20 00:35:55 +01:00
Bastien Guerry 4e5c24ea81 Delete files that sneaked in while fixing the master branch. 2012-03-19 23:48:07 +01:00
Bastien Guerry ecd0562c5f Fix the master branch.
I started from the 78ec8e commit then cherry-picked and squashed
commits that have been done in master since then, except the bad
commits that overwrote the tree (in master) with the tree in maint.

This commit also bumps the version number to 7.8.06.

The only "fix" that was made between 78ec8e and the previous commit
is e0072f which has been reported to break stuff.
2012-03-19 22:01:29 +01:00
Bastien Guerry c44e07a4fa Fix the maint branch.
Thanks to Achim Gratz for his precious help on this.
2012-03-19 20:27:28 +01:00
Bastien Guerry de42649f7b Manually revert maint to e85080.
e85080 is the last correct commit in the maint branch
before releasing 7.8.04.  The 7.8.05 release should be
done from this commit.
2012-03-17 16:28:46 +01:00
Bastien Guerry 73bb18ba37 Manually revert to the Release 7.8.04 tag. 2012-03-17 15:52:24 +01:00
Bastien Guerry 6e534f9c61 Manually revert back to commit e85080.
This fixes a wrong merge that should not have happened:
commit 7e903a merges the master branch into the maint branch,
while we really want to keep the maint branch a bugfix-only
branch.

This commit reverts back the maint branch to its state before
merging the master branch.  From there, we will fix remaining
problems with the maint branch (e.g. copyright issues) then
release this maint branch as Org-mode 7.8.05.
2012-03-17 14:34:01 +01:00
Nicolas Goaziou 94185eac92 org-export: Fix bug with recursive file inclusion and relative paths
* contrib/lisp/org-export.el (org-export-expand-include-keyword): Use
  another optional argument to specify the current working directory.
(org-export-as): Apply changes.
* testing/contrib/lisp/test-org-export.el: Add tests.
* testing/examples/include.org: New test file.
* testing/examples/include2.org: New test file.
2012-02-23 21:28:15 +01:00
Eric Schulte 47eb35bb89 tests of fixed subtree property accumulated behavior 2012-02-15 08:12:35 -07:00
Eric Schulte a3e5f97ee7 New strip-export noweb header argument value
* lisp/ob-exp.el (org-babel-exp-src-block): Strip noweb references on
  export when "strip-export".
* lisp/ob.el (org-babel-common-header-args-w-values): New noweb
  header value.
  (org-babel-merge-params): New noweb header value.
  (org-babel-noweb-p): New noweb header value.
* testing/examples/babel.org (an): Testing new noweb header value.
* testing/lisp/test-ob-exp.el (ob-exp/noweb-strip-export-ensure-strips):
  Testing new noweb header value.
* doc/org.texi (noweb): Document new noweb header value.
2012-02-01 08:19:29 -07:00
Eric Schulte 2395c3eff1 Merge branch 'origin-maint' 2012-01-24 00:02:52 -07:00
Eric Schulte a706f42403 update tests 2012-01-24 00:02:33 -07:00
Eric Schulte 527e6844cc optionally export additional information with call lines
* lisp/ob-exp.el (org-babel-exp-call-line-template): Control export of
  additional call line information.
  (org-babel-exp-non-block-elements): Fancier call line export.
* testing/examples/babel.org (an): Example data to test new call line
  export.
* testing/lisp/test-ob-exp.el (ob-exp/export-call-line-information):
  Test new call line export.
2012-01-23 12:53:15 -07:00
Eric Schulte d3538624e7 Merge branch 'origin-maint'
Conflicts:
	lisp/ob-exp.el
	testing/examples/babel.org
2012-01-23 10:46:03 -07:00
Eric Schulte 43abeaa488 evaluate all executables in buffer order on export
* lisp/ob-exp.el (org-babel-exp-non-block-elements): Map over both
  inline src blocks and call lines on export.
2012-01-23 10:39:38 -07:00
Eric Schulte 10f26fb805 Merge branch 'origin-maint' 2012-01-20 12:00:31 -07:00
Litvinov Sergey f92facd890 Map "screen" to shell-script-mode 2012-01-20 11:47:13 -07:00
Eric Schulte 94f10ddfd7 don't always replace <<noweb>> references when :exports both
* lisp/ob-exp.el (org-babel-exp-results): Alter a copy of info.
* testing/examples/babel.org (an): Example data for test behavior.
* testing/lisp/test-ob-exp.el (ob-exp/noweb-no-export-and-exports-both):
  Confirm proper behavior.
2012-01-16 20:39:12 -07:00
Eric Schulte 4ce9b8044c test for customizable code block export 2012-01-14 12:41:40 -07:00
Bastien Guerry 6e10d36d92 Fix trailing whitespaces. 2012-01-05 18:17:29 +01:00
Martyn Jago b37be0237a Fixed and suplemented pending tests in `test-ob-exp.el'. * testing/examples/babel.org: examples altered and added to * testing/lisp/test-ob-exp.el: tests fixed and added to 2012-01-05 18:16:57 +01:00
Bastien Guerry 07e31dfa0d Delete trailing whitespaces. 2012-01-04 20:02:10 +01:00
Martyn Jago 2ef6100af5 Modify tests to avoid writing to non-temp test-example files.
* testing/examples/babel.org:
* testing/examples/table.org:
* testing/lisp/test-ob.el:
* testing/lisp/test-org-table.el:

Tests that used to write to a test-example file (ie testing/babel.org)
have been modified to write to temp files instead.

This avoids leaving open and /modified/ tests in Emacs when tests are
run by `org-test-run-all-tests'.
2012-01-04 20:00:08 +01:00
Litvinov Sergey 0b7ae6ffb9 ob-octave.el: Add graphical output
* lisp/ob-octave.el: add graphical output to png file

    * testing/examples/ob-octave-test.org: add a test for graphical
      output, and a test for session
2011-12-17 09:04:20 -07:00
Litvinov Sergey e6377a8295 Add string input variables to ob-octave.el. Add tests for ob-octave.el 2011-12-10 06:12:29 -07:00
Eric Schulte 3af89e696a property names ending in plus accumulate
This results in the following behavior.

  #+property: var  foo=1
  #+property: var+ bar=2

  #+begin_src emacs-lisp
    (+ foo bar)
  #+end_src

  #+results:
  : 3

  #+begin_src emacs-lisp
    (org-entry-get (point) "var" t)
  #+end_src

  #+results:
  : foo=1 bar=2

  * overwriting a file-wide property
    :PROPERTIES:
    :var:      foo=7
    :END:

  #+begin_src emacs-lisp
    foo
  #+end_src

  #+results:
  : 7

  #+begin_src emacs-lisp
    (org-entry-get (point) "var" t)
  #+end_src

  #+results:
  : foo=7

  * appending to a file-wide property
    :PROPERTIES:
    :var+:      baz=3
    :END:

  #+begin_src emacs-lisp
    (+ foo bar baz)
  #+end_src

  #+results:
  : 6

  #+begin_src emacs-lisp
    (org-entry-get (point) "var" t)
  #+end_src

  #+results:
  : foo=1 bar=2 baz=3

* lisp/org.el (org-update-property-plist): Updates a given property
  list with a property name and a property value.
  (org-set-regexps-and-options): Use org-update-property-plist.
  (org-entry-get): Use org-update-property-plist.
* testing/examples/property-inheritance.org: Example file for testing
  appending property behavior.
* testing/lisp/test-property-inheritance.el: Tests of appending
  property behavior.
* lisp/ob.el (org-babel-balanced-split): Allow splitting on single
  characters as well as groups of two characters.
  (org-babel-parse-multiple-vars): Split variables on single spaces.
2011-11-15 08:56:24 -07:00
Eric Schulte 7e93b90f88 Standardized code block keywords
Nick Dokos <nicholas.dokos@hp.com> writes:

> Eric Schulte <schulte.eric@gmail.com> wrote:
>
>> The attached updated patch fixes a bug in the original.
>>
>
> Minor problem in applying:
>
> ,----
> | $ git apply ~/Mail/inbox/724
> | /home/nick/Mail/inbox/724:671: trailing whitespace.
> | #+name:
> | /home/nick/Mail/inbox/724:599: new blank line at EOF.
> | +
> | warning: 2 lines add whitespace errors.
> `----

The attached version fixes these issues, Thanks -- Eric

>From 0e43d59ee8d46a63f86780a502de726271bc39de Mon Sep 17 00:00:00 2001
From: Eric Schulte <schulte.eric@gmail.com>
Date: Fri, 28 Oct 2011 10:44:21 -0600
Subject: [PATCH] removing code block, results and call-line synonyms -- BREAKING CHANGE

Following a round of on-list discussion many code block synonyms have
been removed, moving forward the following syntax is valid.

- call lines are specified with #+call:
- code blocks are named with #+name:
- results are named with #+name:, however results generated by a code
  block may still be labeled with #+results:, and tables named with
  #+tblname: will be considered to be named results

The following function may be used to update an existing Org-mode
buffer to the new syntax.

  (defun update-org-buffer ()
    "Update an Org-mode buffer to the new data, code block and call line syntax."
    (interactive)
    (save-excursion
      (flet ((to-re (lst) (concat "^[ \t]*#\\+" (regexp-opt lst t)
                                  "\\(\\[\\([[:alnum:]]+\\)\\]\\)?\\:[ \t]*"))
             (update (re new)
                     (goto-char (point-min))
                     (while (re-search-forward re nil t)
                       (replace-match new nil nil nil 1))))
        (let ((old-re (to-re '("RESULTS" "DATA" "SRCNAME" "SOURCE")))
              (lob-re (to-re '("LOB")))
              (case-fold-search t))
          (update old-re "name")
          (update lob-re "call")))))

Note: If an old version of Org-mode (e.g., the one shipped with Emacs)
      is installed on your system many of the important variables will
      be pre-defined with a defvar and *will not* have their values
      automatically updated, these include the following.
      - org-babel-data-names
      - org-babel-result-regexp
      - org-babel-src-block-regexp
      - org-babel-src-name-regexp
      - org-babel-src-name-w-name-regexp
      It may be necessary to either remove the source code of older
      versions of Org-mode, or to explicitly evaluate the ob.el file.

* lisp/ob-exp.el (org-exp-res/src-name-cleanup): Updated
  Documentation.
* lisp/ob-lob.el (org-babel-block-lob-one-liner-regexp): Updated
  regular expression.
  (org-babel-inline-lob-one-liner-regexp): Updated regular expression.
* lisp/ob-ref.el (org-babel-ref-resolve): Notice when something that
  looks like a data results may actually be a code block.
* lisp/ob-table.el: Updated documentation.
* lisp/ob.el (org-babel-src-name-regexp): Simplified regexp.
  (org-babel-get-src-block-info): Updated match strings.
  (org-babel-data-names): Simplified acceptable names.
  (org-babel-find-named-block): Indentation.
  (org-babel-find-named-result): Updated to not return a code block as
  a result.
* lisp/org.el (org-fontify-meta-lines-and-blocks-1): Removing
  references to old syntactic elements.
  (org-additional-option-like-keywords): Removing references to old
  syntactic elements.
* contrib/babel/library-of-babel.org: Updated to make use of the new
  syntax.
* testing/examples/babel-dangerous.org: Updated to make use of the new
  syntax.
* testing/examples/babel.org: Updated to make use of the new syntax.
* testing/examples/ob-awk-test.org: Updated to make use of the new
  syntax.
* testing/examples/ob-fortran-test.org: Updated to make use of the new
  syntax.
* testing/lisp/test-ob.el: Removed two bad tests which tested the
  literal values of old regular expressions rather than their
  behavior.
2011-11-15 08:56:24 -07:00
Eric Schulte 7720786c41 fix whitespace errors 2011-11-08 13:52:11 -07:00