Commit Graph

203 Commits

Author SHA1 Message Date
Bastien 6a1f6ee1f8 Tiny formatting fixes
* lisp/ox.el (org-export-table-dimensions):
* lisp/ox-texinfo.el (org-texinfo-template):
* lisp/ox-md.el (org-md-link):
* lisp/ox-icalendar.el (org-icalendar-use-UTC-date-time-p):
* lisp/ox-ascii.el (org-ascii-fixed-width):
* lisp/org.el (org-context):
* lisp/org-table.el (org-table-eval-formula)
(org-table-export):
* lisp/org-refile.el:
* lisp/org-plot.el (org-plot/gnuplot-to-grid-data):
* lisp/org-num.el (org-num):
* lisp/org-mouse.el (org-mouse-popup-global-menu)
(org-mouse-context-menu):
* lisp/org-macro.el (org-macro):
* lisp/org-lint.el (org-lint):
* lisp/org-keys.el (org-keys):
* lisp/org-duration.el:
* lisp/org-clock.el (org-clock-get-last-clock-out-time)
(org-clock-update-mode-line, org-find-open-clocks):
* lisp/org-agenda.el (org-diary)
(org-agenda-check-for-timestamp-as-reason-to-ignore-todo-item)
(org-agenda-highlight-todo, org-cmp-alpha)
(org-agenda-filter-by-category):
* lisp/ol.el (org-link-expand-abbrev, ol):
* lisp/ol-docview.el (ol-docview):
* lisp/ol-bibtex.el (org-execute-file-search-in-bibtex)
(org-bibtex, org-bibtex-read):
* lisp/ol-bbdb.el (org-bbdb-anniversary-description):
* lisp/ob-tangle.el (org-babel-tangle-jump-to-org):
* lisp/ob-table.el (org-babel-table-truncate-at-newline):
* lisp/ob-stan.el:
* lisp/ob-sqlite.el (org-babel-sqlite-table-or-scalar):
* lisp/ob-sql.el:
* lisp/ob-shen.el:
* lisp/ob-shell.el (org-babel-prep-session:shell)
(org-babel-prep-session:shell):
* lisp/ob-sed.el (org-babel-execute:sed)
(org-babel-execute:sed):
* lisp/ob-screen.el:
* lisp/ob-sass.el:
* lisp/ob-ruby.el (org-babel-prep-session:ruby)
(org-babel-prep-session:ruby):
* lisp/ob-ref.el (org-babel-ref-resolve, ob-ref):
* lisp/ob-python.el (org-babel-prep-session:python)
(org-babel-prep-session:python):
* lisp/ob-plantuml.el:
* lisp/ob-picolisp.el:
* lisp/ob-perl.el:
* lisp/ob-org.el:
* lisp/ob-octave.el (org-babel-prep-session:octave)
(org-babel-prep-session:octave)
(org-babel-octave-evaluate-session):
* lisp/ob-ocaml.el:
* lisp/ob-mscgen.el (org-babel-execute:mscgen)
(org-babel-execute:mscgen):
* lisp/ob-maxima.el:
(ob-maxima):
* lisp/ob-matlab.el:
* lisp/ob-makefile.el:
* lisp/ob-lua.el (org-babel-prep-session:lua)
(org-babel-prep-session:lua):
* lisp/ob-lisp.el:
* lisp/ob-ledger.el:
* lisp/ob-latex.el (org-babel-expand-body:latex)
(org-babel-expand-body:latex, ob-latex):
* lisp/ob-js.el:
* lisp/ob-java.el:
* lisp/ob-io.el (org-babel-prep-session:io)
(org-babel-prep-session:io):
* lisp/ob-hledger.el:
* lisp/ob-haskell.el:
* lisp/ob-groovy.el (org-babel-groovy-wrapper-method)
(org-babel-groovy-evaluate):
* lisp/ob-gnuplot.el:
* lisp/ob-fortran.el (org-babel-expand-body:fortran)
(org-babel-expand-body:fortran):
* lisp/ob-forth.el (org-babel-forth-session-execute):
* lisp/ob-exp.el (ob-exp):
* lisp/ob-eval.el:
* lisp/ob-emacs-lisp.el:
* lisp/ob-ebnf.el:
* lisp/ob-dot.el:
* lisp/ob-ditaa.el:
* lisp/ob-css.el:
* lisp/ob-core.el (org-babel-put-rownames):
* lisp/ob-coq.el:
* lisp/ob-comint.el:
* lisp/ob-calc.el:
* lisp/ob-awk.el:
* lisp/ob-asymptote.el:
* lisp/ob-abc.el:
* lisp/ob-R.el (org-babel-prep-session:R): Formatting fixes.
2020-02-18 22:57:37 +01:00
Bastien be93859c78 org.el (org-babel-load-file): Load emacs-lisp and elisp src blocks
* lisp/org.el (org-babel-load-file): Load both "emacs-lisp"
and "elisp" source blocks.

* lisp/ob-tangle.el (org-babel-tangle-file)
(org-babel-tangle, org-babel-tangle-collect-blocks): Use a
regular expression to match the language(s) to tangle.

Thanks to Troy Hinckley for reporting this.
2020-02-12 22:40:45 +01:00
Kyle Meyer ff5fc050d3 Update copyright year to 2020 2020-01-01 13:38:46 -05:00
Nicolas Goaziou df30a056b2 Fix tangling bug when major mode for LANGUAGE is not `LANGUAGE-mode'
* lisp/ob-core.el (org-babel-expand-noweb-references):
* lisp/ob-tangle.el (org-babel-tangle): Use `org-src-get-lang-mode' so
as to use proper major mode.

Reported-by: immanuel <immanuel.litzroth@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2019-08/msg00272.html>
2019-08-30 23:36:00 +02:00
Nicolas Goaziou 73c0989037 Fix last commit 2019-08-24 22:58:29 +02:00
Nicolas Goaziou ed048fa83d Fix %start-line in `org-babel-tangle-comment-links'
* lisp/ob-tangle.el (org-babel-tangle-comment-links): %start-line
reports the line number, not the buffer position at the beginning of
line.

Reported-by: immanuel <immanuel.litzroth@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2019-08/msg00267.html>
2019-08-24 22:44:18 +02:00
Christian Dietrich a72466ce8d Fix bug in org-babel-tangle-file with symlinked files
Assume that there is file A and symlink B that points to file A. If
there is an open buffer that points to A and we
call (org-babel-tangle-file "B"), then this function kills the buffer
since get-file-buffer does not follow symlinks.
2019-08-22 09:50:26 +02:00
Nicolas Goaziou 2b00d62816 Change bracket link escape syntax
* contrib/lisp/org-link-edit.el (org-link-edit--link-data):
* lisp/ob-tangle.el (org-babel-tangle-comment-links): Update match-group.
(org-babel-detangle): Remove unnecessary `org-link-escape' call.
(org-babel-tangle-jump-to-org): Update match group.
(org-link-url-hexify):
(org-link-escape-chars): Remove variables.
* lisp/ol.el (org-link--decode-compound): Renamed from
  `org-link--unescape-compound'.
(org-link--decode-single-byte-sequence): Renamed from
`org-link--unescape-single-byte-sequence'.
(org-link-make-regexps): Update `org-link-bracket-re' syntax.
(org-link-encode): New function, renamed from `org-link-escape'.
(org-link-decode): New function, renamed from `org-link-unescape'.
(org-link-escape):
(org-link-unescape): Use new escape syntax.
(org-link-make-string): Apply new escaping rules.
(org-link-display-format):
(org-insert-link): Update match group.
* lisp/org-agenda.el (org-diary):
(org-agenda-format-item):
(org-agenda-to-appt): Update match group.
* lisp/org-clock.el (org-clocktable-write-default): Update match group.
* lisp/org-element.el (org-element-link-parser): Update match group.
* lisp/org-mobile.el (org-mobile-escape-olp):
(org-mobile-locate-entry): Apply function renaming.
* lisp/org-protocol.el (org-protocol-split-data):
(org-protocol-parse-parameters): Apply function renaming.
* lisp/org.el (org-refile): Update match group.
* testing/README (Interactive testing from within Emacs): Fix
  examples.
* testing/lisp/test-ol.el (test-ol/encode): Merge old escape tests.
(test-ol/decode): Merge old unescape tests.
(test-ol/escape):
(test-ol/unescape):
(test-ol/make-string): New tests.
* testing/lisp/test-org-clock.el (test-org-clock/clocktable/link):
* testing/lisp/test-org.el (test-org/custom-id):
(test-org/fuzzy-links):
* testing/lisp/test-ox.el (test-org-export/resolve-fuzzy-link): Update
  tests.
2019-03-10 18:00:36 +01:00
Nicolas Goaziou 3318b50a39 Deprecate `org-link-analytic-bracket-re'
* lisp/ob-tangle.el (org-babel-detangle):
(org-babel-tangle-jump-to-org): Use `org-link-bracket-re'.
* lisp/ol.el (org-link-analytic-bracket-re): Remove variable.
(org-link-make-regexps): Do not set it.
(org-link-display-format): Use `org-link-bracket-re'
(org-link-trim-scheme): New function.
(org-store-link): Remove code duplication.
2019-03-10 18:00:36 +01:00
Nicolas Goaziou ccfea3d8e5 Move `org-fill-template' into "org-macs.el"
* lisp/org.el (org-fill-template): Move function
* lisp/org-macs.el: ...there.
2019-03-10 18:00:36 +01:00
Nicolas Goaziou a486d9cbd7 Move link-related core functions out of "org.el"
* contrib/lisp/org-wl.el (org-wl-store-link-message):
* lisp/Makefile (clean-install):
* lisp/ob-core.el (org-link-bracket-re):
(org-babel-open-src-block-result):
(org-babel-read-element):
(org-babel-read-link):
(org-babel-result-end):
* lisp/ob-tangle.el (org-link-bracket-re):
(org-babel-tangle-single-block):
(org-link-analytic-bracket-re):
(org-babel-detangle):
(org-babel-tangle-jump-to-org):
* lisp/ol.el:
* lisp/org-agenda.el (org-agenda-get-some-entry-text):
(org-diary):
(org-agenda-format-item):
(org-agenda-open-link):
(org-agenda-switch-to):
(org-agenda-to-appt):
* lisp/org-bbdb.el (org-bbdb-store-link):
* lisp/org-bibtex.el (org-bibtex-store-link):
* lisp/org-capture.el (org-capture-fill-template):
* lisp/org-clock.el (org-clocktable-write-default):
(org-clock-get-table-data):
* lisp/org-compat.el (org-doi-server-url):
(org-email-link-description-format):
(org-make-link-description-function):
(org-from-is-user-regexp):
(org-descriptive-links):
(org-url-hexify-p):
(org-context-in-file-links):
(org-keep-stored-link-after-insertion):
(org-display-internal-link-with-indirect-buffer):
(org-confirm-shell-link-function):
(org-confirm-shell-link-not-regexp):
(org-confirm-elisp-link-function):
(org-confirm-elisp-link-not-regexp):
(org-file-complete-link):
(org-email-link-description):
(org-make-link-string):
(org-store-link-props):
(org-add-link-props):
(org-make-link-regexps):
(org-angle-link-re):
(org-plain-link-re):
(org-bracket-link-regexp):
(org-bracket-link-analytic-regexp):
(org-any-link-re):
* lisp/org-docview.el (org-docview-store-link):
(org-docview-complete-link):
* lisp/org-element.el (org-element-link-parser):
* lisp/org-eshell.el (org-eshell-store-link):
* lisp/org-eww.el (org-eww-store-link):
(org-eww-copy-for-org-mode):
* lisp/org-footnote.el (org-footnote-next-reference-or-definition):
* lisp/org-gnus.el (org-gnus-article-link):
(org-gnus-store-link):
* lisp/org-id.el (org-id-store-link):
* lisp/org-info.el (org-info-store-link):
* lisp/org-irc.el (org-irc-erc-store-link):
* lisp/org-mhe.el (org-mhe-store-link):
* lisp/org-pcomplete.el (pcomplete/org-mode/searchhead):
* lisp/org-protocol.el (org-protocol-do-capture):
* lisp/org-rmail.el (org-rmail-store-link):
* lisp/org-w3m.el (org-w3m-store-link):
(org-w3m-copy-for-org-mode):
2019-03-10 18:00:27 +01:00
Bastien f584d37a67 Update copyright year 2019-01-01 11:50:56 +01:00
Nicolas Goaziou 2fda33bfef ob-tangle: Fix tangling order
* lisp/ob-tangle.el (org-babel-tangle-collect-blocks): Preserver order
  of code blocks from the source document.
* testing/lisp/test-ob-tangle.el (ob-tangle/block-order): New test.

Reported-by: Kaushal Modi <kaushal.modi@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2018-10/msg00062.html>
2018-10-11 00:01:50 +02:00
Nicolas Goaziou 8b9c1e15df ob-tangle: Fix `org-babel-detangle'
* lisp/ob-tangle.el (org-babel-tangle-jump-to-org): Preserve position
  in source block only if it doesn't put point outside of the block.

Reported-by: Frederick Giasson <fred@curbside.com>
<http://lists.gnu.org/r/emacs-orgmode/2018-06/msg00008.html>
2018-06-05 11:55:55 +02:00
Aaron Ecay 4afb7f747b Update declare-function calls for functions that have moved.
In cases where functions have moved from org.el into org-macs.el, it
is often possible to replace declare-function by (require 'org-macs)
2018-05-10 01:04:12 +01:00
Tim Landscheidt b289a65be7 Use https for links to orgmode.org
TINYCHANGE
2018-01-19 18:14:58 +01:00
Kyle Meyer 3e1641ef0a Update copyright years 2018-01-07 00:27:54 -05:00
thibault 1613153aac Fix tangling of org block with nested source block
* lisp/ob-tangle.el (org-babel-tangle-single-block): Prevent double unescaping
of source block by removing unnecessary call to `org-unescape-code-in-string'.

* testing/lisp/test-ob-tangle.el (ob-tangle/nested-block) New function.
2017-10-22 12:42:05 +02:00
Paul Eggert ff0dcf52a5 Backport commit bc511a64f from Emacs
Prefer HTTPS to FTP and HTTP in documentation
bc511a64f6da9ab51acc7c8865e80c4a4cb655c2
Paul Eggert
Wed Sep 13 15:54:37 2017 -0700
2017-09-17 00:28:38 -04:00
Paul Eggert d3912e7f32 Backport commit 74b8615fc from Emacs
* lisp/ob-tangle.el (org-babel-tangle-publish): Port to new copy-file
behavior.

Adjust ob-tangle to new copy-file behavior
74b8615fcceba7b92c4938e1bcc92015f10ae899
Paul Eggert
Sun Sep 10 22:31:23 2017 -0700
2017-09-17 00:05:20 -04:00
Kyle Meyer 0d3683f2cd Merge branch 'maint' 2017-01-05 20:23:58 -05:00
Kyle Meyer 713f785017 Update copyright years 2017-01-05 20:19:37 -05:00
Nicolas Goaziou d2c834b215 ob-tangle: Remove useless declarations 2016-12-10 09:54:55 +01:00
Nicolas Goaziou 00ea6a286c ob-tangle: Fix last commit
* lisp/ob-tangle.el (org-babel-tangle-single-block):
  `org-babel-expand-noweb-references' specifically needs to be run in
  the Org document so as to resolve references.
* testing/lisp/test-ob-tangle.el (ob-tangle/continued-code-blocks-w-noweb-ref):
  Make sure a failing test doesn't leave a file behind it.
2016-12-10 00:59:08 +01:00
Nicolas Goaziou 7b148e2d0e ob-tangle: Respect buffer local variables
* lisp/ob-tangle.el (org-babel-spec-to-string): Move some processing...
(org-babel-tangle-single-block): ... there.  This function is called
with the Org buffer as its original buffer whereas the previous one is
not.

This is a follow-up to 026fb75, which was reverted.

Reported-by: David Dynerman <emperordali@block-party.net>
<http://permalink.gmane.org/gmane.emacs.orgmode/110670>
2016-12-10 00:20:38 +01:00
Nicolas Goaziou 04799d8e39 Revert "ob-tangle: Respect buffer local variables"
This reverts commit 026fb75ddb.
2016-12-10 00:19:45 +01:00
Nicolas Goaziou 026fb75ddb ob-tangle: Respect buffer local variables
* lisp/ob-tangle.el (org-babel-tangle): Make sure buffer local
  variables from Org document are taken into consideration in tangled
  document.

Reported-by: David Dynerman <emperordali@block-party.net>
<http://permalink.gmane.org/gmane.emacs.orgmode/110577>
2016-12-03 23:55:28 +01:00
Marco Wahl ece6e39dfc ob-tangle: Fix jump from tangle to org
* lisp/ob-tangle.el (org-babel-tangle-jump-to-org): Fix the jump from a
  tangled part to the respective org in the case when an org-id defines
  the linking.

  The recent (buggy) behavior was to find the file which has the org-id as
  filename.
2016-09-28 14:07:56 +02:00
Aaron Ecay 79650ffbbd Use assq instead of assoc for :keywords
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-J.el (org-babel-execute:J):
* lisp/ob-R.el (org-babel-edit-prep:R):
(org-babel-expand-body:R):
(org-babel-execute:R):
(org-babel-variable-assignments:R):
(org-babel-R-initiate-session):
* lisp/ob-abc.el (org-babel-execute:abc):
* lisp/ob-asymptote.el (org-babel-execute:asymptote):
* lisp/ob-awk.el (org-babel-execute:awk):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
(org-babel-execute:clojure):
* lisp/ob-core.el (org-babel-expand-body:generic):
(org-babel-load-in-session):
(org-babel-initiate-session):
(org-babel-open-src-block-result):
(org-babel-process-params):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
* lisp/ob-ditaa.el (org-babel-execute:ditaa):
* lisp/ob-dot.el (org-babel-execute:dot):
* lisp/ob-ebnf.el (org-babel-execute:ebnf):
* lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp):
(org-babel-execute:emacs-lisp):
* lisp/ob-exp.el (org-babel-exp-process-buffer):
(org-babel-exp-do-export):
(org-babel-exp-code):
* lisp/ob-forth.el (org-babel-execute:forth):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-gnuplot.el (org-babel-gnuplot-process-vars):
(org-babel-expand-body:gnuplot):
(org-babel-execute:gnuplot):
* lisp/ob-groovy.el (org-babel-execute:groovy):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-io.el (org-babel-execute:io):
* lisp/ob-java.el (org-babel-execute:java):
* lisp/ob-js.el (org-babel-execute:js):
* lisp/ob-latex.el (org-babel-execute:latex):
* lisp/ob-ledger.el (org-babel-execute:ledger):
* lisp/ob-lilypond.el (org-babel-lilypond-process-basic):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
(org-babel-execute:lisp):
* lisp/ob-lua.el (org-babel-execute:lua):
* lisp/ob-maxima.el (org-babel-execute:maxima):
* lisp/ob-mscgen.el (org-babel-execute:mscgen):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-execute:octave):
* lisp/ob-org.el (org-babel-execute:org):
* lisp/ob-perl.el (org-babel-execute:perl):
* lisp/ob-picolisp.el (org-babel-execute:picolisp):
* lisp/ob-plantuml.el (org-babel-execute:plantuml):
* lisp/ob-python.el (org-babel-execute:python):
* lisp/ob-ruby.el (org-babel-execute:ruby):
* lisp/ob-sass.el (org-babel-execute:sass):
* lisp/ob-scala.el (org-babel-execute:scala):
* lisp/ob-scheme.el (org-babel-execute:scheme):
* lisp/ob-screen.el (org-babel-execute:screen):
(org-babel-prep-session:screen):
* lisp/ob-shell.el (org-babel-execute:shell):
(org-babel-variable-assignments:shell):
(org-babel-sh-evaluate):
* lisp/ob-shen.el (org-babel-execute:shen):
* lisp/ob-sql.el (org-babel-execute:sql):
* lisp/ob-sqlite.el (org-babel-execute:sqlite):
* lisp/ob-tangle.el (org-babel-tangle):
(org-babel-tangle-single-block):
* lisp/org-src.el (org-src-associate-babel-session):
* lisp/org.el (org-next-link):
Use `assq' instead of `assoc' with :keyword keys.
2016-09-23 11:20:09 +01:00
Aaron Ecay d350baf2db babel: change single-armed ‘if’ statements to ‘when’
* lisp/ob-comint.el (org-babel-comint-eval-invisibly-and-wait-for-file):
* lisp/ob-core.el (org-babel-initiate-session):
(org-babel-hide-result-toggle):
(org-babel-insert-result):
* lisp/ob-eval.el (org-babel--shell-command-on-region):
* lisp/ob-table.el (org-babel-table-truncate-at-newline):
* lisp/ob-tangle.el (org-babel-tangle):
Change `if' without else to `when'.
2016-09-03 02:45:27 +01:00
Nicolas Goaziou de24694f05 Turn org-mode into Org or Org mode
Use Org or Org mode instead of org-mode or Org-mode according to
"Documentation standards".
2016-08-23 22:13:56 +02:00
Nicolas Goaziou c4da20a2f3 Silence byte-compiler
* lisp/ob-core.el (org-babel-process-params): Silence byte-compiler.
* lisp/ob-groovy.el (org-babel-groovy-evaluate):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-io.el (org-babel-io-evaluate):
* lisp/ob-octave.el (org-babel-octave-evaluate-external-process):
(org-babel-octave-evaluate-session):
* lisp/ob-perl.el (org-babel-perl-evaluate):
* lisp/ob-python.el (org-babel-python-evaluate-external-process):
(org-babel-python-evaluate-session):
* lisp/ob-ruby.el (org-babel-ruby-pp-wrapper-method):
(org-babel-ruby-evaluate):
* lisp/ob-scala.el:
* lisp/ob-tangle.el:
(org-babel-tangle-collect-blocks):
* lisp/org-agenda.el (org-agenda-get-category-icon):
(org-agenda-todo-yesterday):
* lisp/org-bbdb.el (org-bbdb-anniv-extract-date):
(org-bbdb-make-anniv-hash):
(org-bbdb-anniversaries-future):
* lisp/org-bibtex.el (org-bibtex-fleshout):
(org-bibtex-read):
(org-bibtex-write):
* lisp/org-capture.el (org-capture-set-target-location):
(org-capture-get-indirect-buffer):
(org-mks):
* lisp/org-clock.el (org-clock--oldest-date):
(org-clock-resolve):
(org-clock-sum):
(org-clock-special-range):
(org-clocktable-steps):
* lisp/org-ctags.el (org-ctags-create-tags):
* lisp/org-element.el (org-element--interpret-affiliated-keywords):
(org-element--cache-shift-positions):
(org-element--cache-sync):
(org-element--cache-submit-request):
* lisp/org-habit.el (org-habit-parse-todo):
* lisp/org-inlinetask.el (org-inlinetask-hide-tasks):
* lisp/org-lint.el (org-lint--generate-reports):
* lisp/org-mouse.el (org-mouse-get-context):
* lisp/org-plot.el (org-plot/gnuplot-to-grid-data):
(org-plot/gnuplot):
* lisp/ox-ascii.el (org-ascii--current-text-width):
(org-ascii--current-justification):
(org-ascii--build-caption):
(org-ascii--checkbox):
(org-ascii-item):
* lisp/ox-html.el (org-html-footnote-section):
* lisp/ox-latex.el (org-latex--make-option-string):
* lisp/ox-odt.el (org-odt-toc):
(org-odt-add-automatic-style):
(org-odt-format-label):
(org-odt-link--inline-image):
(org-odt--render-image/formula):
(org-odt--enumerable-image-p):
(org-odt--enumerable-latex-image-p):
(org-odt--enumerable-formula-p):
(org-odt-do-format-code):
(org-odt-table-cell): Silence byte-compiler.
2016-07-25 17:10:53 +02:00
Nicolas Goaziou 4f63cfabb3 Deprecate `org-babel-trim' in favor of `org-trim'
* lisp/org.el (org-trim): Add optional argument.

* contrib/lisp/ob-mathematica.el (org-babel-execute:mathematica):
* contrib/lisp/org-bibtex-extras.el (obe-html-export-citations):
* contrib/lisp/org-mime.el (org-mime-compose):
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-calc.el (org-babel-execute:calc):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
* lisp/ob-core.el (org-babel-initiate-session):
(org-babel-parse-multiple-vars):
(org-babel-read-element):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
(org-babel-trim): Mark obsolete.
* lisp/ob-forth.el (org-babel-forth-session-execute):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-latex.el (org-babel-expand-body:latex):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-octave-evaluate-session):
* lisp/ob-python.el (org-babel-python-evaluate-external-process):
(org-babel-python-evaluate-session):
* lisp/ob-ref.el (org-babel-ref-split-args):
* lisp/ob-ruby.el (org-babel-ruby-evaluate):
* lisp/ob-shell.el (org-babel-sh-evaluate):
* lisp/ob-table.el (org-sbe):
* lisp/ob-tangle.el (org-babel-spec-to-string):
* lisp/org-bibtex.el (org-bibtex-get):
* testing/lisp/test-ob.el (test-ob/parse-header-args): Use `org-trim'
  instead of `org-babel-trim'.
2016-06-21 15:33:00 +02:00
Nicolas Goaziou 69552bd42f ob-tangle: Fix failing test on Emacs 24.3
* lisp/ob-tangle.el (org-babel-tangle): Do not use `add-to-list' on
  a let-bound symbol.
2016-06-19 00:57:03 +02:00
Nicolas Goaziou 65e9dcee8d ob-tangle: Use lexical binding
* lisp/ob-tangle.el (org-babel-process-comment-text):
(org-babel-spec-to-string):
(org-babel-tangle-single-block):
(org-babel-tangle-comment-links):
(org-babel-tangle-jump-to-org): Silence byte-compiler.
2016-06-19 00:38:22 +02:00
Kyle Meyer 19cf68da90 Fix remaining declare-function issues
* lisp/ob-shell.el (org-babel-comint-in-buffer):
(org-babel-comint-with-output):
* lisp/org-table.el (org-export-create-backend):
* lisp/org.el (org-babel-do-in-edit-buffer): Indicate that FN is not a
defun.
* lisp/ob-tangle.el (org-string-nw-p):
* lisp/org-table.el (org-export-create-backend):
(org-export-data-with-backend):
(org-export-filter-apply-functions):
(org-export-first-sibling-p):
(org-export-get-backend):
(org-export-get-environment):
(org-export-install-filters):
(org-export-table-has-special-column-p):
(org-export-table-row-is-special-p): Correct source file name.
* lisp/ob-R.el (ess-wait-for-process):
* lisp/org-clock.el (calendar-iso-to-absolute):
* lisp/org-list.el (org-previous-line-empty-p):
* lisp/org-pcomplete.el (org-entry-properties):
* lisp/org-table.el (org-export-data-with-backend):
(org-export-get-environment):
* lisp/org.el (org-element-interpret-data): Correct argument list.
2016-05-15 18:59:20 -04:00
Paul Eggert 1f046ea4b1 Backport commit 65c8c7c from Emacs
* lisp/ob-awk.el (orgtbl-to-generic):
* lisp/ob-core.el (orgtbl-to-generic):
* lisp/ob-exp.el (org-element-context):
* lisp/ob-gnuplot.el (org-time-string-to-time)
(orgtbl-to-generic):
* lisp/ob-haskell.el (org-export-to-file):
* lisp/ob-latex.el (org-create-formula-image)
(org-latex-compile):
* lisp/ob-python.el (run-python):
* lisp/ob-tangle.el (org-link-escape, org-back-to-heading):
* lisp/org-colview.el (org-agenda-redo):
* lisp/org-feed.el (url-retrieve-synchronously):
* lisp/org-info.el (Info-find-node):
* lisp/org-list.el (org-previous-line-empty-p):
* lisp/org-macs.el (org-string-match-p):
* lisp/org.el (org-beamer-mode):
Fix prototype to match current definition.
* lisp/ob-comint.el (tramp-flush-directory-property):
* lisp/ob-tangle.el (org-babel-update-block-body):
* lisp/org-bibtex.el (org-babel-trim):
* lisp/org-pcomplete.el (org-export-backend-options):
* lisp/org-protocol.el (org-publish-get-project-from-filename):
Fix file name in declare-function.
* lisp/ob-comint.el (with-parsed-tramp-file-name)
* lisp/ob-core.el (with-parsed-tramp-file-name):
* lisp/org.el (org-beamer-mode):
Append ‘t’ to declare-function, since the declaration isn’t a defun.
* lisp/ob-core.el (org-save-outline-visibility):
Remove; not needed.
* lisp/ob-scheme.el (run-geiser, geiser-mode)
(geiser-eval-region, geiser-repl-exit):
* lisp/ox-org.el (htmlize-buffer):
Prepend "ext:" to file name, since it is not part of Emacs.
* lisp/org-gnus.el (nnimap-group-overview-filename):
Remove decl, since function was removed.
* lisp/org-macro.el (org-with-wide-buffer):
Omit unnecessary (and mismatching) decl.
* lisp/org-clock.el (calendar-iso-to-absolute):
Declare calendar-iso-to-absolute instead, since it is the
non-obsolete version of this function.
* lisp/org-compat.el (w32-focus-frame):
Remove decl, since function is now obsolete.

Pacify ‘make check-declare’
65c8c7cb96c14f9c6accd03cc8851b5a3459049e
Paul Eggert
Sat May 14 19:57:44 2016 -0700
2016-05-15 18:59:16 -04:00
Nicolas Goaziou ffb08b28cd ob-tangle: Fix :comment org behavior
* lisp/ob-tangle.el (org-babel-spec-to-string): Do not try to comment
  empty text.

Reported-by: Titus von der Malsburg <malsburg@posteo.de>
<http://permalink.gmane.org/gmane.emacs.orgmode/104637>
2016-02-01 00:01:25 +01:00
Nicolas Goaziou 67efff2fd8 ob-tangle: Fix `org-babel-tangle-jump-to-org'
* lisp/ob-tangle.el (org-babel-tangle-jump-to-org): Find correct
  location in the Org document.

* testing/lisp/test-ob-tangle.el (ob-tangle/jump-to-org): New test.
2016-01-31 20:38:35 +01:00
Nicolas Goaziou a03175d6d9 ob-tangle: Silence byte-compiler 2016-01-02 17:40:22 +01:00
Nicolas Goaziou 59f00529d4 Update copyright years 2016-01-02 17:06:30 +01:00
Nicolas Goaziou e2ac979d9e ob-tangle: Fix commented links
* lisp/ob-tangle.el (org-babel-spec-to-string):
(org-babel-tangle-collect-blocks): Fix numbering and relative path of
commented links.

* testing/lisp/test-ob-tangle.el (ob-tangle/comment-links-numbering):
  New test.

Reported-by: Tobias Müller <mllertobias@gmx.de>
<http://permalink.gmane.org/gmane.emacs.orgmode/103861>
2016-01-02 17:05:00 +01:00
Kyle Meyer 2c349cc65a ob-tangle: Check that publishing directory exists
* lisp/ob-tangle.el (org-babel-tangle-publish): Create publishing
  directory if it doesn't exist.

Reported-by: Arun Isaac <theroarofthedragon@gmail.com>
<http://permalink.gmane.org/gmane.emacs.orgmode/101697>
2015-10-03 18:08:52 -04:00
Kyle Meyer 36233d976d ob-tangle: Expand paths for publishing
* lisp/ob-tangle.el (org-babel-tangle-file): Return expanded file name.

Reported-by:  Arun Isaac <theroarofthedragon@gmail.com>
<http://permalink.gmane.org/gmane.emacs.orgmode/101290>
2015-10-02 23:19:57 -04:00
Paul Eggert c86a10b0bc Backport commit 284c470 from Emacs master branch
Backslash cleanup in Elisp source files
284c470ef752967fcd8bae6a450dc138462b1e49
Paul Eggert
Thu Sep 17 16:09:39 2015 -0700
2015-09-21 18:38:39 -04:00
Nicolas Goaziou 62dc515ae5 ob-tangle: Fix commenting links at column 0
* lisp/ob-tangle.el (org-babel-spec-to-string): Ignore invisible
  characters when commenting in destination file.

* testing/lisp/test-ob-tangle.el (ob-tangle/comment-links-at-left-margin):
New test.

Reported-by: Rainer M Krug <Rainer@krugs.de>
<http://permalink.gmane.org/gmane.emacs.orgmode/101002>
2015-09-10 11:12:20 +02:00
Kyle Meyer 85e0c1ce75 Fix tangling in indirect buffers
* lisp/ob-tangle.el (org-babel-tangle-single-block): Get file name from
  base buffer.
(org-babel-tangle): Use file name from attribute list returned by
org-babel-tangle-single-block.

Reported-by: Rainer M Krug <Rainer@krugs.de>
<http://permalink.gmane.org/gmane.emacs.orgmode/100845>
2015-09-09 09:54:18 -04:00
Paul Eggert ecf3a4af2c Backport remaining changes from commit 7e09ef0
Add changes from Emacs repo that should have been backported with
bb77dd2.

Update copyright year to 2015
7e09ef09a479731d01b1ca46e94ddadd73ac98e3
Paul Eggert
Thu Jan 1 14:26:41 2015 -0800
2015-08-10 02:17:19 -04:00
Nicolas Goaziou 626caa4e9e ob-tangle: Silence byte-compiler 2015-06-16 00:09:20 +02:00
Nicolas Goaziou 90df55ea7b ob-tangle: Small refactoring
* lisp/ob-tangle.el (org-babel-tangle-collect-blocks): Refactor.
2015-06-15 21:38:14 +02:00