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* lisp/ob.el (org-babel-result-cond): This function should now be used by all language backends to handle the processing of raw code block output into scalar results, table results, or ignored results depending on the value of result-params. * lisp/ob-C.el (org-babel-C-execute): Use org-babel-result-cond. * lisp/ob-R.el (org-babel-R-evaluate-external-process): Use org-babel-result-cond. (org-babel-R-evaluate-session): Use org-babel-result-cond. * lisp/ob-awk.el (org-babel-execute:awk): Use org-babel-result-cond. * lisp/ob-clojure.el (org-babel-execute:clojure): Use org-babel-result-cond. * lisp/ob-emacs-lisp.el (org-babel-execute:emacs-lisp): Use org-babel-result-cond. * lisp/ob-fortran.el (org-babel-execute:fortran): Use org-babel-result-cond. * lisp/ob-io.el (org-babel-io-evaluate): Use org-babel-result-cond. * lisp/ob-java.el (org-babel-execute:java): Use org-babel-result-cond. * lisp/ob-lisp.el (org-babel-execute:lisp): Use org-babel-result-cond. * lisp/ob-maxima.el (org-babel-execute:maxima): Use org-babel-result-cond. * lisp/ob-picolisp.el (org-babel-execute:picolisp): Use org-babel-result-cond. * lisp/ob-python.el (org-babel-python-evaluate-external-process): Use org-babel-result-cond. (org-babel-python-evaluate-session): Use org-babel-result-cond. * lisp/ob-scala.el (org-babel-scala-evaluate): Use org-babel-result-cond. * lisp/ob-sh.el (org-babel-sh-evaluate): Use org-babel-result-cond. * lisp/ob-shen.el (org-babel-execute:shen): Use org-babel-result-cond. * lisp/ob-sql.el (org-babel-execute:sql): Use org-babel-result-cond. * lisp/ob-sqlite.el (org-babel-execute:sqlite): Use org-babel-result-cond.
167 lines
5.7 KiB
EmacsLisp
167 lines
5.7 KiB
EmacsLisp
;;; ob-sql.el --- org-babel functions for sql evaluation
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;; Copyright (C) 2009-2012 Free Software Foundation, Inc.
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;; Author: Eric Schulte
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;; Keywords: literate programming, reproducible research
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;; Homepage: http://orgmode.org
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;; This file is part of GNU Emacs.
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;; GNU Emacs is free software: you can redistribute it and/or modify
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;; it under the terms of the GNU General Public License as published by
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;; the Free Software Foundation, either version 3 of the License, or
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;; (at your option) any later version.
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;; GNU Emacs is distributed in the hope that it will be useful,
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;; but WITHOUT ANY WARRANTY; without even the implied warranty of
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;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;; GNU General Public License for more details.
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;; You should have received a copy of the GNU General Public License
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;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
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;;; Commentary:
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;; Org-Babel support for evaluating sql source code.
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;; (see also ob-sqlite.el)
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;;
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;; SQL is somewhat unique in that there are many different engines for
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;; the evaluation of sql (Mysql, PostgreSQL, etc...), so much of this
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;; file will have to be implemented engine by engine.
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;;
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;; Also SQL evaluation generally takes place inside of a database.
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;;
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;; For now lets just allow a generic ':cmdline' header argument.
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;;
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;; TODO:
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;;
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;; - support for sessions
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;; - add more useful header arguments (user, passwd, database, etc...)
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;; - support for more engines (currently only supports mysql)
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;; - what's a reasonable way to drop table data into SQL?
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;;
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;;; Code:
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(require 'ob)
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(eval-when-compile (require 'cl))
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(declare-function org-table-import "org-table" (file arg))
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(declare-function orgtbl-to-csv "org-table" (table params))
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(declare-function org-table-to-lisp "org-table" (&optional txt))
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(defvar org-babel-default-header-args:sql '())
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(defvar org-babel-header-args:sql
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'((engine . :any)
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(out-file . :any)))
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(defun org-babel-expand-body:sql (body params)
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"Expand BODY according to the values of PARAMS."
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(org-babel-sql-expand-vars
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body (mapcar #'cdr (org-babel-get-header params :var))))
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(defun org-babel-execute:sql (body params)
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"Execute a block of Sql code with Babel.
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This function is called by `org-babel-execute-src-block'."
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(let* ((result-params (cdr (assoc :result-params params)))
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(cmdline (cdr (assoc :cmdline params)))
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(engine (cdr (assoc :engine params)))
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(in-file (org-babel-temp-file "sql-in-"))
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(out-file (or (cdr (assoc :out-file params))
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(org-babel-temp-file "sql-out-")))
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(header-delim "")
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(command (case (intern engine)
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('dbi (format "dbish --batch '%s' < %s | sed '%s' > %s"
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(or cmdline "")
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(org-babel-process-file-name in-file)
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"/^+/d;s/^\|//;$d"
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(org-babel-process-file-name out-file)))
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('monetdb (format "mclient -f tab %s < %s > %s"
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(or cmdline "")
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(org-babel-process-file-name in-file)
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(org-babel-process-file-name out-file)))
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('msosql (format "osql %s -s \"\t\" -i %s -o %s"
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(or cmdline "")
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(org-babel-process-file-name in-file)
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(org-babel-process-file-name out-file)))
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('mysql (format "mysql %s < %s > %s"
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(or cmdline "")
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(org-babel-process-file-name in-file)
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(org-babel-process-file-name out-file)))
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('postgresql (format
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"psql -A -P footer=off -F \"\t\" -f %s -o %s %s"
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(org-babel-process-file-name in-file)
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(org-babel-process-file-name out-file)
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(or cmdline "")))
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(t (error "No support for the %s SQL engine" engine)))))
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(with-temp-file in-file
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(insert
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(case (intern engine)
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('dbi "/format partbox\n")
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(t ""))
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(org-babel-expand-body:sql body params)))
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(message command)
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(shell-command command)
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(org-babel-result-cond result-params
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(with-temp-buffer
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(progn (insert-file-contents-literally out-file) (buffer-string)))
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(with-temp-buffer
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;; need to figure out what the delimiter is for the header row
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(with-temp-buffer
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(insert-file-contents out-file)
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(goto-char (point-min))
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(when (re-search-forward "^\\(-+\\)[^-]" nil t)
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(setq header-delim (match-string-no-properties 1)))
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(goto-char (point-max))
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(forward-char -1)
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(while (looking-at "\n")
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(delete-char 1)
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(goto-char (point-max))
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(forward-char -1))
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(write-file out-file))
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(org-table-import out-file '(16))
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(org-babel-reassemble-table
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(mapcar (lambda (x)
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(if (string= (car x) header-delim)
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'hline
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x))
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(org-table-to-lisp))
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(org-babel-pick-name (cdr (assoc :colname-names params))
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(cdr (assoc :colnames params)))
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(org-babel-pick-name (cdr (assoc :rowname-names params))
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(cdr (assoc :rownames params))))))))
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(defun org-babel-sql-expand-vars (body vars)
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"Expand the variables held in VARS in BODY."
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(mapc
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(lambda (pair)
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(setq body
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(replace-regexp-in-string
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(format "\$%s" (car pair))
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((lambda (val)
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(if (listp val)
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((lambda (data-file)
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(with-temp-file data-file
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(insert (orgtbl-to-csv
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val '(:fmt (lambda (el) (if (stringp el)
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el
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(format "%S" el)))))))
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data-file)
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(org-babel-temp-file "sql-data-"))
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(if (stringp val) val (format "%S" val))))
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(cdr pair))
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body)))
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vars)
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body)
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(defun org-babel-prep-session:sql (session params)
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"Raise an error because Sql sessions aren't implemented."
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(error "SQL sessions not yet implemented"))
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(provide 'ob-sql)
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;;; ob-sql.el ends here
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