org-mode/lisp/langs/org-babel-shell.el

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;;; org-babel-shell.el --- org-babel functions for shell evaluation
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;; Copyright (C) 2009 Eric Schulte
;; Author: Eric Schulte
;; Keywords: literate programming, reproducible research
;; Homepage: http://orgmode.org
;; Version: 0.01
;;; License:
;; This program is free software; you can redistribute it and/or modify
;; it under the terms of the GNU General Public License as published by
;; the Free Software Foundation; either version 3, or (at your option)
;; any later version.
;;
;; This program is distributed in the hope that it will be useful,
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;; GNU General Public License for more details.
;;
;; You should have received a copy of the GNU General Public License
;; along with GNU Emacs; see the file COPYING. If not, write to the
;; Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor,
;; Boston, MA 02110-1301, USA.
;;; Commentary:
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;; Org-Babel support for evaluating shell source code.
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;;; Code:
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(require 'org-babel)
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(require 'shell)
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(org-babel-add-interpreter "sh")
(defun org-babel-execute:sh (body params)
"Execute a block of Shell commands with org-babel. This
function is called by `org-babel-execute-src-block'."
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(message "executing Shell source code block")
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(let* ((vars (org-babel-ref-variables params))
(result-params (split-string (or (cdr (assoc :results params)) "")))
(result-type (cond ((member "output" result-params) 'output)
((member "value" result-params) 'value)
(t 'value)))
(full-body (concat
(mapconcat ;; define any variables
(lambda (pair)
(format "%s=%s"
(car pair)
(org-babel-shell-var-to-shell (cdr pair))))
vars "\n") "\n" body "\n\n")) ;; then the source block body
(session (org-babel-shell-initiate-session (cdr (assoc :session params))))
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(results (org-babel-shell-evaluate (org-babel-shell-session-buffer session) full-body result-type)))
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(if (member "scalar" result-params)
results
(setq results (let ((tmp-file (make-temp-file "org-babel-ruby")))
(with-temp-file tmp-file (insert results))
(org-babel-import-elisp-from-file tmp-file)))
(if (and (member "vector" results) (not (listp results)))
(list (list results))
results))))
(defun org-babel-shell-var-to-shell (var)
"Convert an elisp var into a string of shell commands
specifying a var of the same value."
(if (listp var)
(concat "[" (mapconcat #'org-babel-shell-var-to-shell var ", ") "]")
(format "%S" var)))
(defun org-babel-shell-table-or-results (results)
"If the results look like a table, then convert them into an
Emacs-lisp table, otherwise return the results as a string."
(org-babel-read
(if (string-match "^\\[.+\\]$" results)
(org-babel-read
(replace-regexp-in-string
"\\[" "(" (replace-regexp-in-string
"\\]" ")" (replace-regexp-in-string
", " " " (replace-regexp-in-string
"'" "\"" results)))))
results)))
;; functions for comint evaluation
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(defvar org-babel-shell-buffers '(:default . nil))
(defun org-babel-shell-session-buffer (session)
(cdr (assoc session org-babel-shell-buffers)))
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(defun org-babel-shell-initiate-session (&optional session)
"If there is not a current inferior-process-buffer in SESSION
then create. Return the initialized session."
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(save-window-excursion
(let* ((session (if session (intern session) :default))
(shell-buffer (org-babel-shell-session-buffer session))
(newp (not (org-babel-comint-buffer-livep shell-buffer))))
(shell shell-buffer)
(when newp
(setq shell-buffer (current-buffer))
(org-babel-comint-wait-for-output shell-buffer))
(setq org-babel-shell-buffers (cons (cons session shell-buffer) (assq-delete-all session org-babel-shell-buffers)))
session)))
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(defvar org-babel-shell-eoe-indicator "echo 'org_babel_shell_eoe'"
"Used to indicate that evaluation is has completed.")
(defvar org-babel-shell-eoe-output "org_babel_shell_eoe"
"Used to indicate that evaluation is has completed.")
(defun org-babel-shell-evaluate (buffer body &optional result-type)
"Pass BODY to the Shell process in BUFFER. If RESULT-TYPE equals
'output then return a list of the outputs of the statements in
BODY, if RESULT-TYPE equals 'value then return the value of the
last statement in BODY."
(org-babel-comint-in-buffer buffer
(let ((string-buffer "")
(full-body (mapconcat #'org-babel-chomp
(list body org-babel-shell-eoe-indicator) "\n"))
results)
(flet ((my-filt (text) (setq string-buffer (concat string-buffer text))))
;; setup filter
(add-hook 'comint-output-filter-functions 'my-filt)
;; pass FULL-BODY to process
(goto-char (process-mark (get-buffer-process buffer)))
(insert full-body)
(comint-send-input)
;; wait for end-of-evaluation indicator
(while (progn
(goto-char comint-last-input-end)
(not (save-excursion (and (re-search-forward comint-prompt-regexp nil t)
(re-search-forward (regexp-quote org-babel-shell-eoe-output) nil t)))))
(accept-process-output (get-buffer-process buffer)))
;; remove filter
(remove-hook 'comint-output-filter-functions 'my-filt))
;; (message (format "raw-results=%S" string-buffer)) ;; debugging
;; (message (format "split-results=%S" (mapcar #'org-babel-trim (split-string string-buffer comint-prompt-regexp)))) ;; debugging
;; split results with `comint-prompt-regexp'
(setq results (cdr (member org-babel-shell-eoe-output
(reverse (mapcar #'org-babel-shell-strip-weird-long-prompt
(mapcar #'org-babel-trim (split-string string-buffer comint-prompt-regexp)))))))
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;; (message (replace-regexp-in-string "%" "%%" (format "processed-results=%S" results))) ;; debugging
(or (case result-type
(output (org-babel-trim (mapconcat #'org-babel-trim (reverse results) "\n")))
(value (car results))
(t (reverse results))) ""))))
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(defun org-babel-shell-strip-weird-long-prompt (string)
(while (string-match "^% +[\r\n$]+ *" string)
(setq string (substring string (match-end 0))))
string)
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(provide 'org-babel-shell)
;;; org-babel-shell.el ends here