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Author SHA1 Message Date
Eric Schulte 1c0e5f0ade added functional test for deeply nested argument lists 2009-07-22 16:10:53 -06:00
Eric Schulte 34cf22bdaa DONE Fix nested evaluation 
and commenting out debugging statements
 2009-07-22 16:05:13 -06:00
Eric Schulte 66faa937f8 DONE deeply nested arguments still fails 
added a function `org-babel-ref-split-args' for splitting arguments
  into top-level balanced expressions
 2009-07-22 16:04:19 -06:00
Eric Schulte b10c0fb70b added discussion of correct parsing of deeply nested arguments 2009-07-22 12:09:10 -06:00
Eric Schulte bbc08d3949 added TODO deeply nested arguments still fails 2009-07-22 12:05:02 -06:00
Eric Schulte 8df56a1026 DEFERRED Default over-ridden 2009-07-22 12:02:21 -06:00
Eric Schulte 703e6152b4 DEFERRED Rely on defaults (one of which is missing) 2009-07-22 12:00:47 -06:00
Eric Schulte 30259844b9 DONE Both supplied 2009-07-21 16:46:53 -06:00
Eric Schulte fe0532e509 DONE One supplied, one default 
We are now skipping results lines when resolving references which
  specify arguments, as the arguments would change the value of the
  source-code block.
 2009-07-21 16:46:26 -06:00
Eric Schulte 2bfa420c6a DONE empty parens () not recognised as lob call 2009-07-21 16:27:48 -06:00
Eric Schulte 68bd53cf7c Merge branch 'master' into investigation 
Conflicts:
	org-babel.org
 2009-07-21 16:00:42 -06:00
Dan Davison 5d1ee80683 Adding tests of default args using lob evaulation. 2009-07-21 15:48:45 -04:00
Dan Davison ad7b17c393 Moving nested evaluation from Tasks to Bugs 2009-07-21 15:48:14 -04:00
Eric Schulte 53c08df3ae so it looks like regardless of the syntax used we're not overriding 
the default argument values.
 2009-07-21 12:22:59 -06:00
Eric Schulte a58dd8e3af bringing in o-b.org from evaluation branch 2009-07-21 12:15:38 -06:00
Eric Schulte d4b7914f7c DONE gnuplot [7/7] 2009-07-20 14:04:37 -06:00
Eric Schulte 85dc35656d DONE gnuplot sessions 2009-07-20 13:33:53 -06:00
Eric Schulte ed42f95106 DEFERRED header argument specifying 3D data 2009-07-20 13:20:06 -06:00
Eric Schulte 104f05ef5e DONE helpers from org-plot.el 2009-07-20 13:10:28 -06:00
Eric Schulte e5b2e307fa removed the result-params from the let in org-babel-gnuplot, 
keeping the vars line in the let for now because of the peculiar
  handling of the vars in gnuplot.
 2009-07-20 13:10:11 -06:00
Eric Schulte 809462e3ee Merge branch 'master' into gnuplot 
Conflicts:
	lisp/langs/org-babel-gnuplot.el

With respect to the conflict, I will try removing the lines you
mentioned before my next commit.
 2009-07-20 13:07:29 -06:00
Eric Schulte c81479b161 added a :file header argument to gnuplot 2009-07-20 13:04:40 -06:00
Dan Davison 4589aacb51 A couple of fixes to sketched-out parsing algorithm. 2009-07-20 01:33:40 -04:00
Dan Davison 5a5a4253c6 Some notes on possibly adding a recursive evaluation mechanism. 
Currently we can't have nested function calls, and I think that a general fix for that would require going the standard route of constructing a parse tree and evaluating it recursively.
 2009-07-20 01:24:33 -04:00
Eric Schulte 307c7667db still working on gnuplot variable support 2009-07-19 16:40:28 -06:00
Dan Davison a16a15ea80 Merging R-results into master. 2009-07-19 18:09:22 -04:00
Dan Davison b766b094a0 Using temp function definition to tidy R evaluation code. 2009-07-19 18:03:33 -04:00
Eric Schulte 9bdddde454 gnuplot: switching to using user defined variables for handling variables 
This will require gnuplot version 4.2 or up
 2009-07-19 15:46:05 -06:00
Dan Davison 2b66de1c1b Reorganising R evaluation code. 
With this change we avoid messing about extracting the output from the
comint buffer in the :results value case (the value has already been
written to file).
 2009-07-19 17:45:00 -04:00
Dan Davison 7ac2e0d45f Using o-b-chomp rather than o-b-trim on R output. 
This keeps columns of STDOUT correctly aligned.
 2009-07-19 17:35:49 -04:00
Eric Schulte 01c6bd2b33 pulled the gnuplot variable processing out into it's own function 2009-07-19 15:30:40 -06:00
Eric Schulte 20eec8d94b additional requirements and initialization for gnuplot 2009-07-19 15:01:47 -06:00
Eric Schulte 006d6d1193 deferring more sophisticated gnuplot prebuilt helpers 2009-07-19 14:53:12 -06:00
Dan Davison 162b522728 Fixing srcname function call regexps. 
But still some improvement of this to be done (see bugs section).
 2009-07-19 14:29:10 -04:00
Dan Davison bd1ff11b4e Merge commit 'origin/master' 2009-07-19 13:58:03 -04:00
Dan Davison aa1747b065 Quite a few revisions / additions to the tasks and bugs lists. 2009-07-19 13:56:38 -04:00
Dan Davison e4d14d41ec This should have been part of the parent commit (911e77a7c9) 2009-07-19 13:55:42 -04:00
Eric Schulte b57617bc53 Merge branch 'master' into gnuplot 2009-07-19 11:37:58 -06:00
Eric Schulte 1df8d69c7c some minor additional discussion in o-b.org 2009-07-19 11:17:32 -06:00
Eric Schulte 585f69d1f7 Merge branch 'master' into gnuplot 2009-07-19 11:12:09 -06:00
Eric Schulte c9752352ea added task: "TODO gnuplot support for column/row names" 
Adding support for column/row names (as currently being implemented
for R) on a language by language basis is definitely the right way to
handle this hline/header issue.  I am going to try to do the same for
gnuplot.
 2009-07-19 11:11:55 -06:00
Eric Schulte 28c3262848 fixed variable name in org-babel-R-evaluate 2009-07-19 11:06:44 -06:00
Eric Schulte 91301b8c29 Merge branch 'master' into gnuplot 2009-07-19 11:02:17 -06:00
Dan Davison 911e77a7c9 Code rearrangement: restrict R column names changes to org-babel-R.el. 
On reflection this is (currently) R-specific functionality and should
not affect the code in org-babel.el.
 2009-07-19 12:01:00 -04:00
Dan Davison 8294122f8f Trying to retain whitespace in output results from R. 
I don't believe this solves it, but chomp is more the right thing to
do than trim. I'd like to retain all the whitespace so that alignment
of columns is correct in stdout.
 2009-07-19 01:47:37 -04:00
Dan Davison 7aafbb0cfc Updating / adding discussion to o-b.org. 2009-07-19 01:45:38 -04:00
Dan Davison daf3e210da Updating o-b.org: two new R colname tests and graphics output discussion. 2009-07-19 01:08:45 -04:00
Dan Davison 062bc09d84 Adding support for column names (header line) when using R. 
Unlike the other languages, it's central to R to be able to index
columns of a data frame d, either by d[,"columnname"] of d$columnname.

With this change, if colnames are present in the *input* from
org-babel, the corresponding R variable is *always* constructed with
the colnames.

In addition, with the :colnames header arg, the *output* to elisp/org
buffer contains the colnames separated from the rest of the table by
'hline. This behaviour is not default because other languages may
expect a simple table without the 'hline.
 2009-07-19 01:07:07 -04:00
Eric Schulte 4ff540bfd7 started bringing in options from org-plot 2009-07-18 18:05:11 -06:00
Eric Schulte b8fad91406 Merge branch 'master' into gnuplot 2009-07-18 17:57:34 -06:00