* lisp/oc.el (org-cite-main-affixes): New function.
* lisp/oc-natbib.el (org-cite-natbib--build-optional-arguments): Use
new function.
* testing/lisp/test-oc.el (test-org-cite/main-affixes): New test.
* lisp/org-macro.el (org-macro--collect-macros): Multiple lines are
allowed for AUTHOR keyword (per `org-export-options-alist') so make
sure we collect all of them.
* testing/lisp/test-org-macro.el (test-org-macro/author): Add test.
Reported-by: Vinicius Vinicius <vinicius.vin@yandex.com>
<http://lists.gnu.org/r/emacs-orgmode/2021-10/msg00727.html>
* lisp/oc.el (org-cite-process-citations): Add a space before citation
only if it is preceded by a quotation mark.
* testing/lisp/test-oc.el (test-org-cite/export-capability): Add
tests.
Reported-by: Denis Maier <denismaier@mailbox.org>
<http://lists.gnu.org/r/emacs-orgmode/2021-09/msg00085.html>
* lisp/org-macs.el (org-plist-delete-all): New function.
* lisp/ox-publish.el (org-publish-file): Add
`org-html-publish-to-html' as the default publishing function.
* testing/lisp/test-ox-publish.el (org-test-publish): Use
`org-plist-delete-all' to remove properties from the plist.
Reported-by: Christopher W. Ryan
See <https://list.orgmode.org/CAELBRWLgV-s6SGX=cevtN7iW8htwiLezR469T-cGMWE_6iX1+A@mail.gmail.com>
* lisp/ob-R.el (ob-session-async-R-indicator): Add constant
representing a prefix R to identity session.
(ob-session-async-org-babel-R-evaluate-session): New function to
evaluate R src block asynchrously.
(ob-session-async-R-value-callback): New function that calls back
the result of the asynchronous evaluation.
(org-babel-R-evaluate): Add `async' parameter and call
`ob-session-async-org-babel-R-evaluate-session' if `async'
parameter is present.
(org-babel-execute:R): Call `org-babel-comint-use-async' to check
if async is among `params' and add async parameter to
`org-babel-R-evaluate'.
* testing/lisp/test-ob-R.el: Add 7 more tests for async
evaluations, also taken from the `ob-session-async' package.
This is almost a carbon copy of Jack Kamm's `ob-session-async'.
The original source code can be found
https://github.com/jackkamm/ob-session-async.
Please refer to the following thread to trace back the discussion
on async evaluation in R:
https://list.orgmode.org/87eed9g9p6.fsf@gmail.com/
testing/lisp/test-org-protocol.el
(test-org-protocol/org-protocol-store-link)
(test-org-protocol/org-protocol-capture): Cases to check that "+" is
decoded to space in query parameters (new style of URIs) but preserved
in path components (old style of org-protocol links).
* lisp/ob-core.el (org-babel-disassemble-tables,
org-babel-gnuplot-process-vars): Use `proper-list-p' check instead of
`listp'.
(org-babel-disassemble-tables): Check list length before trying to
remove hline from a table assignment.
* testing/lisp/test-ob.el (test-ob/cons-cell-as-variable): Add the
test.
* lisp/ox-latex.el (org-latex-src-block): Prevent leak of percent sign
from caption to `format' first argument causing export failure due to
insufficient argument number. The fix covers only the case of verbatim
environment.
* testing/lisp/test-ox.el
(test-org-export/latex-src-block-verbatim-caption): New test for src
block LaTeX export with cases of various formatting of caption and
verbatim environment. Check that percent signs in caption and source
block body do not lead to errors.
Reported-by: Charest, Luc <charest.luc@hydroquebec.com>
<https://lists.gnu.org/archive/html/emacs-orgmode/2021-08/msg00017.html>
* lisp/org.el (org-add-log-setup): Always run `org-add-log-note' via
`post-command-hook'. Otherwise, there is no way to know if a note was
requested for `this-command'. Running `org-add-log-note' directly
would, for example, break `org-auto-repeat-maybe' as reported in [1].
* lisp/org-agenda.el (org-agenda-todo): Avoid reintroducing the bug
fixed in c670379adf.
* testing/lisp/test-org.el: Add test checking the reported bug.
[1] https://orgmode.org/list/CAOn=hbcaW1R6vtun-E2r4LS=j3dp=VjqmjGtzy8UC1SyPArKbA@mail.gmail.com
* lisp/org.el (org-insert-heading): Fix insertion of headings when
point is before any heading in the case of "respect content" insertion.
Kudos to Victor Stoichita. https://orgmode.org/list/87lf4594t3.fsf@svictor.net/
* lisp/org-footnote.el (org-footnote--allow-reference-p): Allow
inserting footnotes at the end of table cells.
* testing/lisp/test-org-footnote.el (test-org-footnote/new): Add test.
* lisp/oc.el (org-cite--allowed-p): Allow inserting a citation after
two or more spaces at the end of a table cell.
* testing/lisp/test-oc.el (test-org-cite/insert-capability): Add
tests.
* lisp/ox.el (org-export-raw-string): New function
(org-export-data):
(org-export-with-backend): React to raw objects.
* testing/lisp/test-ox.el (test-org-export/raw-string): New test.
A raw object is a pseudo-object (i.e., special object type that exists
only during export) with the property of being exported as-is, with no
processing from an export back-end.
It is particularly useful to add contents to, or pre-process objects
from, a parse tree.
* lisp/org-element.el (org-element-citation-key-re):
(org-element-citation-prefix-re): New variables.
(org-element--set-regexps): Set `org-element--object-regexp' so it
finds citations.
(org-element-all-objects): Add citation and citation-reference
objects.
(org-element-recursive-objects): Add citation object.
(org-element-object-restrictions): Add citation and citation-reference
to restrictions.
(org-element-secondary-value-alist): citation and citation references
can hold secondary strings.
(org-element-citation-parser):
(org-element-citation-interpreter):
(org-element-citation-reference-parser):
(org-element-citation-reference-interpreter): New functions.
(org-element--object-lex): Parse citations and citations references.
* testing/lisp/test-org-element.el (test-org-element/citation-parser):
(test-org-element/citation-reference-parser):
(test-org-element/citation-interpreter): New tests.
This patch adds support for [cite:@key], [cite:pre @key post]
[cite:global prefix; pre @key1 post; pre @key2 post; global suffix]
objects along with their [cite/style: ...] counterparts.
* lisp/org-capture.el (org-capture-fill-template): Changed to use
completing-read-multiple.
* lisp/org.el (org-set-tags-command): Changed to use
completing-read-multiple.
(org-change-tag-in-region): Changed to use a simple completion table.
* testing/lisp/test-org.el (test-org/set-tags-command): Fixed tests.
Change various places which use `completing-read' to read tags using a
custom completion function to instead use `completing-read-multiple'
with a completion table instead.
This makes tab completion play better with alternative completion
frameworks such as vertico, selectrum, etc.
`org-change-tag-in-region' only reads a single tag, so it is changed
to use a completion table with `completing-read'. This also makes it
play better with alternative completion frameworks.
Note that there is still one use for `org-tags-completion-function',
which is for completing tag matches. Completing tag matches is
different from completing lists of tags since the separators (+, -,
etc) have semantic meaning. This commit does not address that use
case.
Adds functionality to ob-comint.el to implement async session eval on
a per-language basis. Adds a reference implementation for ob-python.
* lisp/ob-comint.el (org-babel-comint-with-output): Remove comment.
(org-babel-comint-async-indicator, org-babel-comint-async-buffers,
org-babel-comint-async-file-callback,
org-babel-comint-async-chunk-callback,
org-babel-comint-async-dangling): Add buffer-local variables used for
async comint evaluation.
(org-babel-comint-use-async): Add function to determine whether block
should be evaluated asynchronously.
(org-babel-comint-async-filter): Add filter function to attach to
comint-output-filter-functions for babel async eval.
(org-babel-comint-async-register): Add function to setup buffer
variables and hooks for session eval.
(org-babel-comint-async-delete-dangling-and-eval): Add helper function
for async session eval.
* lisp/ob-python.el (org-babel-execute:python): Check for async header
argument.
(org-babel-python-evaluate): Check whether to use async evaluation.
(org-babel-python-async-indicator): Add constant for indicating the
start/end of async evaluations.
(org-babel-python-async-evaluate-session): Add function for Python
async eval.
*
testing/lisp/test-ob-python.el (test-ob-python/async-simple-session-output):
Unit test for Python async session eval.
(test-ob-python/async-named-output): Unit test that Python async eval
can replace named output.
(test-ob-python/async-output-drawer): Unit test that Python async eval
works with drawer results.
* lisp/org-element.el (org-element-drawer-parser): A single ":END:"
line should not be recognized as a drawer.
* testing/lisp/test-org-element.el (test-org-element/drawer-parser):
Add test.
Reported-by: Ihor Radchenko <yantar92@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2021-05/msg00819.html>
* testing/lisp/test-org.el (test-org/with-electric-indent)
(test-org/without-electric-indent): Make sure
`org-adapt-indentation' is consistent with expected results.
* testing/lisp/test-org-element.el (test-org-element/cache-bugs): A
new test documenting a known bug:
1. Create initial file like:
P0
P1
| a | b |
<point>| c | d |
Note that second line of the table is not indented. Now,
org-element-at-point returns table-row.
2. Modify the file to test org-element-cache
P0
- item
P1
| a | b |
<point>| c | d |
Now, the first (indented) row of the table belongs to item. The
second row should be an individual table and org-element-at-point
returns table.
* testing/lisp/test-org-element.el (test-org-element/cache): Add
spaces to make the "abcd" table a single table. The old version uses
example org text with two tables and was passing because of another
bug in org-element-cache. Testing the old version with
org-element-use-cache set to nil would yield error, while it should
not.
* lisp/ol.el (org-link-make-regexps): Allow URLs with up to two
levels of nested brackets.
* lisp/org.el (org-link-plain-re): Update docstring.
* testing/lisp/test-ol.el: Add tests for the plain link regular
expression.
(org-link-plain-re): Update docstring. Now,
Now, URLs like [1] can be matched. The new regexp is based on [2].
The docstring of `org-link-plain-re' explicitly mentions that the
regexp must contain groups for the link type and the path.
[1] https://doi.org/10.1016/0160-791x(79)90023-x
[2] https://daringfireball.net/2010/07/improved_regex_for_matching_urls
* testing/lisp/test-org.el (test-org/with-electric-indent)
(test-org/without-electric-indent): Make sure
`org-adapt-indentation' is consistent with expected results.
* testing/lisp/test-org-element.el (test-org-element/cache): Add
spaces to make the "abcd" table a single table. The old version uses
example org text with two tables and was passing because of another
bug in org-element-cache. Testing the old version with
org-element-use-cache set to nil would yield error, while it should
not.
* lisp/ol.el (org-link-make-regexps): Allow URLs with up to two
levels of nested brackets.
* lisp/org.el (org-link-plain-re): Update docstring.
* testing/lisp/test-ol.el: Add tests for the plain link regular
expression.
(org-link-plain-re): Update docstring. Now,
Now, URLs like [1] can be matched. The new regexp is based on [2].
The docstring of `org-link-plain-re' explicitly mentions that the
regexp must contain groups for the link type and the path.
[1] https://doi.org/10.1016/0160-791x(79)90023-x
[2] https://daringfireball.net/2010/07/improved_regex_for_matching_urls
* testing/lisp/test-ob-R.el (ert-deftest test-ob-r/NA-blank): new test
for :results value. Make sure that NA values in R data.frames are
empty string instead of nil previously
see https://orgmode.org/list/87pn1dufm2.fsf@gmail.com/
* testing/lisp/test-ob-R.el (test-ob-r/output-with-<>): new test for output
angle brackets
(test-ob-R/output-nonprinted): New test for output results that aren't
explicitly printed. (Here all the lines are expected to be printed
not just the last one)
Patch suggested by Jack Kamm:
https://orgmode.org/list/87h7slgbi5.fsf@gmail.com/
* testing/org-test.el (org-test-at-time): Use correct number of
arguments in 'decode-time cl-letf binding. `decode-time' accepts up to
3 arguments on master.
The wrong-numbre-of-arguments error is raised on Emacs master
configured with native-comp support when running make test on Org mode
master. Native-comp modifies function calls with optional arguments
in the way that omitted arguments are still provided as `nil'. For
example, `decode-time' called as (decode-time time) in lisp source may
be compiled into (decode-time time nil nil) call by native-compiler.
If redefined `decode-time' does not accept 3 arguments, it result in
error.
See Emacs bug#48133.
* lisp/ob-tangle.el (org-babel-tangle-collect-blocks): Group
collected blocks by tangled file name.
(org-babel-tangle): Avoid quadratic behavior in number of blocks and
set modes before writing to file.
* testing/lisp/test-ob-tangle.el (ob-tangle/block-order): Update test.
* testing/lisp/test-org-protocol.el
(test-org-protocol/org-protocol-store-link-file,
test-org-protocol/org-protocol-capture-file): Add tests to document
that existing calls to `org-protocol-sanitize-uri' could make passed
URLs invalid by changing number of slashes after scheme.
Till a fix of the problem the new tests are marked as expected failures.
Unless a relatively recent commit 5748615c48, I would believe that
`org-protocol-sanitize-uri' was added by mistake to the initial
implementation. Capture URLs are anyway escaped with percent encoding.
* testing/lisp/test-org-protocol.el
(test-org-protocol/org-protocol-parse-parameters): Specify that the case
simulating real life capture uses new style parameters string
to prevent test failure.
It looks like a typo survived since addition of this case in 2216f4d2c7.
* lisp/org-agenda.el (org-agenda-finalize):
(org-agenda-format-item): Do not downcase tags.
(org-downcase-keep-props): Remove unused function.
(org-agenda-filter-expand-tags): Do not case-fold search.
* lisp/org.el (org-tags-expand): Document `downcased' argument as
obsolete and do not allow to expand downcased tags.
* testing/lisp/test-org.el (test-org/tags-expand): Remove test for
downcased tags expansion.
* doc/org-manual.org (TODO keywords, tags, properties, etc.):
Suggest that user-defined are usually lowercase, but don't make it
a requirement.
Reported-by: David Masterson <dsmasterson92630@outlook.com>
Link: https://orgmode.org/list/SJ0PR03MB5455D8D0C4F71AA495A9ABF79B709@SJ0PR03MB5455.namprd03.prod.outlook.com/