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Author SHA1 Message Date
Kyle Meyer 291993888d Merge branch 'maint' 2021-01-01 15:02:10 -05:00
Kyle Meyer 99eafe3787 Update copyright year to 2021 2021-01-01 14:59:01 -05:00
Kyle Meyer 3f1c044441 ob-core: Drop redundant Edebug specification list 
* lisp/ob-core.el (org-babel-result-cond): Don't set specification
list with def-edebug-spec because it is already defined with a debug
declaration.
 2020-11-06 00:49:07 -05:00
Matt Huszagh d9884cfa70 lisp/ob-core.el: Allow passing empty vector to :file-desc to omit description 
* doc/org-manual.org (Type): Document empty vector argument for
file-desc.
* etc/ORG-NEWS (New argument for ~file-desc~ babel header): Add entry
to NEWS.
* lisp/ob-core.el (org-babel--file-desc): Add new function to evaluate
file description value.
(org-babel-execute-src-block): Correctly evaluate file description
when executing src block.
(org-babel-insert-result): Correctly evaluate file description value
when inserting the result of src block execution into the buffer.
* testing/lisp/test-ob.el (test-ob/file-desc-header-argument): Add
test case for new behavior.
 2020-10-06 23:13:12 -04:00
Kyle Meyer 469ee63401 ob-core: Fix handling of multiple noweb refs in same line 
* lisp/ob-core.el (org-babel-expand-noweb-references): Don't anchor
noweb regexp at start of line to allow multiple matches per line.
* testing/lisp/test-ob-tangle.el (ob-tangle/multiple-noweb-in-line):
Add test.

This fixes a regression introduced by c1aed9f80 (ob-core: Refactor
`org-babel-expand-noweb-references', 2020-01-12), which was part of
the 9.4 release.

Reported-by: Tom Gillespie <tgbugs@gmail.com>
Ref: https://orgmode.org/list/CA+G3_PO2yO1jMMpdrkc39BGQQ2eU5X4FzTEJVotjDJo-50dsqQ@mail.gmail.com
 2020-09-15 23:45:16 -04:00
Bastien 15a6836e4f ob-core.el: Fix `org-babel--string-to-number' 
* lisp/ob-core.el (org-babel--string-to-number): Exclude strings
not matching "^[0-9-e.+ ]+$" from being interpreted as numbers.

Reported-by: Kaushal Modi <kaushal.modi@gmail.com>
https://orgmode.org/list/CAFyQvY14iek+op12Vm7+jrniGEVU2yha7kuPtNtFQAso6d=PjQ@mail.gmail.com/
 2020-09-06 22:41:21 +02:00
Bastien f0a9677d90 ob-core.el: Silence byte-compiler 2020-09-06 11:27:11 +02:00
Kyle Meyer d4f48821c1 Merge branch 'maint' into master 2020-09-05 23:41:50 -04:00
Kyle Meyer e535da6e4f ob-core: Avoid duplicate body expansion logic 
* lisp/ob-core.el (org-babel--expand-body): New function.
(org-babel-check-confirm-evaluate):
(org-babel-execute-src-block): Use org-babel--expand-body.

As of 727c6d7fe (lisp/ob-core.el: org-babel-check-confirm-evaluate
strip coderefs, 2020-09-04), org-babel-check-confirm-evaluate and
org-babel-execute-src-block use the same logic to expand the body and
strip coderefs.  Move that code to a helper function.

This patch is functionally equivalent to the patch originally proposed
by Tom Gillespie at
https://orgmode.org/list/CA+G3_PNi3uMvBiWgBdKuC3C6VJt1T1j-RKH43LRqYbr+4NS8ZA@mail.gmail.com
 2020-09-05 23:39:08 -04:00
Tom Gillespie 3e1c0b0f44 lisp/ob-core.el: org-babel-check-confirm-evaluate strip coderefs 
* lisp/ob-core.el (org-babel-check-confirm-evaluate): strip coderefs
before passing the body of the block to org-confirm-babel-evaluate
using the same let block as is used in org-babel-execute-src-block.
 2020-09-05 23:38:35 -04:00
Bastien 479e09a8e2 Merge branch 'maint' 2020-09-05 16:41:03 +02:00
Ihor Radchenko f45591630f ob-core.el: Use `buffer-base-buffer' where needed 
* lisp/ob-core.el (org-babel-result-to-file): Use
`buffer-base-buffer' so that `buffer-file-name' returns correct
results in indirect buffers too.

See <https://orgmode.org/list/87eeos3w7v.fsf@localhost>

TINYCHANGE
 2020-09-05 16:40:45 +02:00
Kyle Meyer 7bc18ebbed ob-core: Avoid table conversion warning for empty results 
* lisp/ob-core.el (org-babel-import-elisp-from-file): Don't try to
convert empty file to a table.
* testing/lisp/test-ob.el (test-ob/import-elisp-from-file): Add tests.

If org-babel-import-elisp-from-file is called with an empty file
(which many ob- libraries do when there are no results), feeding that
to org-table-import leads to a beginning-of-buffer error.  Before
14878f3f9 (ob-core: Display warning on failure to read results,
2020-05-21), this error was hard to notice because, after catching it,
it was reported as a quickly buried message.  After that commit, it is
displayed as a warning, which is not appropriate for the common and
unproblematic case of empty results.

Avoid the warning by only doing the table conversion if the file has
content.  Another option would be to do the table conversion but add a
beginning-of-buffer arm to the surrounding condition-case.  However,
that risks swallowing other sources of that error.

Reported-by: Colin Baxter <m43cap@yandex.com>
<https://orgmode.org/list/878se3nhbj.fsf@yandex.com>
 2020-09-01 00:02:49 -04:00
John Herrlin ea946353aa ob-core: file-mode option in source code block arguments 
* ob-core.el (org-babel-execute-src-block): Source code block header
argument `:file-mode' can set file permissions if `:file' argument is
provided.
(org-babel-common-header-args-w-values): Add `:file-mode' to common
header arguments.

TINYCHANGE
 2020-08-02 22:59:25 -04:00
Kyle Meyer a103f3f3ee Merge branch 'maint' 2020-08-02 22:56:03 -04:00
Kyle Meyer df5a836375 ob-core: Call org-confirm-babel-evaluate with expanded noweb refs 
* lisp/ob-core.el (org-babel-check-confirm-evaluate): Expand noweb
references in the body passed to org-confirm-babel-evaluate.
* testing/lisp/test-ob.el (test-ob/check-eval-noweb-expanded): New
test.

When noweb references are set to be expanded for evaluation,
org-confirm-babel-evaluate should receive the expanded body so that it
can make its decision based on what actually will be evaluated
(without resorting to calling org-babel-get-src-block-info itself).

Note that this results in up to three calls to
org-babel-expand-noweb-references.  Possible ways to avoid this are
discussed at the thread referenced below.

Reported-by: Tom Gillespie <tgbugs@gmail.com>
https://orgmode.org/list/CA+G3_PNi3uMvBiWgBdKuC3C6VJt1T1j-RKH43LRqYbr+4NS8ZA@mail.gmail.com/
 2020-08-02 22:55:16 -04:00
stardiviner 758b039c04 fix 5f0a9cca3 missing space 
* lisp/ob-core.el (org-babel-demarcate-block): Replace wrong newline
with missing space.
 2020-06-01 15:50:19 +02:00
Bastien 5f0a9cca3d lisp/ob-core.el: Use lower-case by default for block keywords 
* lisp/ob-core.el (org-babel-demarcate-block): Use lower-case
by default.
 2020-05-25 11:51:57 +02:00
Kyle Meyer 14878f3f9a ob-core: Display warning on failure to read results 
* lisp/ob-core.el (org-babel-import-elisp-from-file): Show handled
errors with display-warning rather than a message because the latter
is quickly overridden by subsequent messages, making it difficult if
not impossible for the user to spot.

The scope of the save-window-excursion call would need to be reduced
for the display-warning buffer to be shown, but nothing appears to
change the window configuration, so just drop the
save-window-excursion call.

Reported-by: Greg Minshall <minshall@umich.edu>
<2449663.1588516024@apollo2.minshall.org>
 2020-05-24 11:56:43 -04:00
Nicolas Goaziou c76bacc483 ob: Ignore RESULTS keyword case 
* lisp/ob-core.el (org-babel-current-result-hash):
(org-babel-hide-hash):
(org-babel-hide-all-hashes):
(org-babel-result-hide-all):
(org-babel-hide-result-toggle-maybe):
(org-babel-hide-result-toggle):
(org-babel--clear-results-maybe):
(org-babel-remove-result): Bind `case-fold-search' to t before looking
for `org-babel-result-regexp'.
 2020-05-13 18:13:18 +02:00
Nicolas Goaziou 89c759f3ad ob: Replace angle brackets with parenthesis in Babel hashes 
* lisp/ob-core.el (org-babel-hash-show-time): Remove
unnecessary :version keyword.
(org-babel-result-regexp):
(org-babel--insert-results-keyword): Remove angle brackets from time
stamp in hash.
* testing/lisp/test-ob.el (test-ob/where-is-src-block-result): Update
test.

Reported-by: stardiviner <numbchild@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2020-05/msg00198.html>
 2020-05-13 15:35:56 +02:00
Nicolas Goaziou e68ae40bdb babel: Remove unneeded declare function 2020-04-28 09:51:20 +02:00
Mattias Engdegård 989a51105c Backport commit d5a7df8c0 from Emacs 
* lisp/ob-core.el (org-babel-remove-temporary-directory): Use
directory-files-no-dot-files-regexp.

Use directory-files-no-dot-files-regexp wherever possible
d5a7df8c02f04102d50a5cd2290262f59f2b1415
Mattias Engdegård
Thu Apr 16 12:14:38 2020 +0200
 2020-04-20 00:42:44 -04:00
Kyle Meyer b359de549e Merge branch 'maint' 2020-04-20 00:42:38 -04:00
Mattias Engdegård bf99b6dc11 Backport commit 4acdd7fe5 from Emacs 
* lisp/ob-core.el (org-babel-remove-temporary-directory):
Use (rx (or (not ".") "...")), translated into "[^.]\\|\\.\\.\\.", to
match anything but "." and "..".

Fix edge case errors in filename-matching regexps
4acdd7fe58ae9f94102afeca67b0383141d597da
Mattias Engdegård
Tue Apr 14 12:25:16 2020 +0200

Note(km): Replaced bare "." with (any ".") for Emacs < 27
compatibility.  4acdd7fe5 was on the emacs-27 branch, but a commit on
their master (d5a7df8c0) will supersede this.
 2020-04-20 00:41:39 -04:00
Kyle Meyer 9e385d1bab Merge branch 'maint' 2020-04-09 22:29:48 -04:00
Kyle Meyer 6f1b837492 Silence byte-compiler 
These both show up when compiling files separately (e.g., 'make
single').

ob-core already assumes ob-tangle is loaded based on declared
functions, presumably because ob.el is given responsibility for
collectively loading these pieces.  org.el loads org-attach within the
body of a function before calling org-attach-dir.
 2020-04-09 22:27:06 -04:00
Nicolas Goaziou 06fe9d6b05 ob: Improve handling of :wrap header 
* lisp/ob-core.el (org-babel-insert-result): Improve handling of :wrap
header.
* testing/lisp/test-ob.el (test-ob/inline-src_blk-wrap): New test.
(test-ob/preserve-comma-escape): Add test.
 2020-04-07 01:42:35 +02:00
Nicolas Goaziou 0a7e382c27 Merge branch 'maint' 2020-04-07 01:22:18 +02:00
Nicolas Goaziou e3373f4beb ob-core: Properly replace results in special blocks 
* lisp/ob-core.el (org-babel-result-end): Handle results in special
blocks.
* testing/lisp/test-ob.el (test-ob/replace-special-block-result): New
test.
 2020-04-07 01:21:33 +02:00
Mattias Engdegård b78583a1c1 Backport commit 770f76f05 from Emacs 
Make regexps smaller and faster by removing terms that are superfluous
by virtue of standing next to another term that matches more.  See
https://lists.gnu.org/archive/html/emacs-devel/2020-01/msg00949.html
for details.

* lisp/ob-core.el (org-babel-remove-result):
* lisp/ob-fortran.el (org-babel-fortran-ensure-main-wrap):
* lisp/org-capture.el (org-capture-set-target-location):
* lisp/org-compat.el (org-maybe-keyword-time-regexp):
* lisp/org-table.el (org-table-expand-lhs-ranges):
Remove subsumed repetitions.

Remove subsumed repetitions in regexps
770f76f050376bbd77a3cc8cf44db57cf855a27c
Mattias Engdegård
Thu Feb 20 16:05:18 2020 +0100
 2020-03-15 22:51:31 -04:00
Nicolas Goaziou e18415d02c ob: Fix case when replacing Noweb reference 
* lisp/ob-core.el (org-babel-expand-noweb-references): Use FIXEDCASE.
* testing/lisp/test-ob.el (test-ob/noweb-expansion): Add test.

Reported-by: Sebastian Miele <sebastian.miele@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2020-03/msg00070.html>
 2020-03-09 23:10:04 +01:00
Bastien 4150832d43 Merge branch 'maint' 2020-02-19 10:56:20 +01:00
Bastien d0018ce62c ob-core.el: Fix `org-babel--string-to-number' 
* lisp/ob-core.el (org-babel--string-to-number): Prevent
strings containing whitespaces after being trimmed to be
interpreted as numbers.
 2020-02-19 10:55:36 +01:00
Bastien 09877e5be2 Merge branch 'maint' 2020-02-19 10:39:51 +01:00
Bastien 6b2a7cb20b ob-core.el: Correctly interpret all numbers 
* lisp/ob-core.el (org-babel--string-to-number): Correctly
interpret all numbers.

Thanks to Vladimir Nikishkin for reporting this.
 2020-02-19 10:39:37 +01:00
Bastien 6a1f6ee1f8 Tiny formatting fixes 
* lisp/ox.el (org-export-table-dimensions):
* lisp/ox-texinfo.el (org-texinfo-template):
* lisp/ox-md.el (org-md-link):
* lisp/ox-icalendar.el (org-icalendar-use-UTC-date-time-p):
* lisp/ox-ascii.el (org-ascii-fixed-width):
* lisp/org.el (org-context):
* lisp/org-table.el (org-table-eval-formula)
(org-table-export):
* lisp/org-refile.el:
* lisp/org-plot.el (org-plot/gnuplot-to-grid-data):
* lisp/org-num.el (org-num):
* lisp/org-mouse.el (org-mouse-popup-global-menu)
(org-mouse-context-menu):
* lisp/org-macro.el (org-macro):
* lisp/org-lint.el (org-lint):
* lisp/org-keys.el (org-keys):
* lisp/org-duration.el:
* lisp/org-clock.el (org-clock-get-last-clock-out-time)
(org-clock-update-mode-line, org-find-open-clocks):
* lisp/org-agenda.el (org-diary)
(org-agenda-check-for-timestamp-as-reason-to-ignore-todo-item)
(org-agenda-highlight-todo, org-cmp-alpha)
(org-agenda-filter-by-category):
* lisp/ol.el (org-link-expand-abbrev, ol):
* lisp/ol-docview.el (ol-docview):
* lisp/ol-bibtex.el (org-execute-file-search-in-bibtex)
(org-bibtex, org-bibtex-read):
* lisp/ol-bbdb.el (org-bbdb-anniversary-description):
* lisp/ob-tangle.el (org-babel-tangle-jump-to-org):
* lisp/ob-table.el (org-babel-table-truncate-at-newline):
* lisp/ob-stan.el:
* lisp/ob-sqlite.el (org-babel-sqlite-table-or-scalar):
* lisp/ob-sql.el:
* lisp/ob-shen.el:
* lisp/ob-shell.el (org-babel-prep-session:shell)
(org-babel-prep-session:shell):
* lisp/ob-sed.el (org-babel-execute:sed)
(org-babel-execute:sed):
* lisp/ob-screen.el:
* lisp/ob-sass.el:
* lisp/ob-ruby.el (org-babel-prep-session:ruby)
(org-babel-prep-session:ruby):
* lisp/ob-ref.el (org-babel-ref-resolve, ob-ref):
* lisp/ob-python.el (org-babel-prep-session:python)
(org-babel-prep-session:python):
* lisp/ob-plantuml.el:
* lisp/ob-picolisp.el:
* lisp/ob-perl.el:
* lisp/ob-org.el:
* lisp/ob-octave.el (org-babel-prep-session:octave)
(org-babel-prep-session:octave)
(org-babel-octave-evaluate-session):
* lisp/ob-ocaml.el:
* lisp/ob-mscgen.el (org-babel-execute:mscgen)
(org-babel-execute:mscgen):
* lisp/ob-maxima.el:
(ob-maxima):
* lisp/ob-matlab.el:
* lisp/ob-makefile.el:
* lisp/ob-lua.el (org-babel-prep-session:lua)
(org-babel-prep-session:lua):
* lisp/ob-lisp.el:
* lisp/ob-ledger.el:
* lisp/ob-latex.el (org-babel-expand-body:latex)
(org-babel-expand-body:latex, ob-latex):
* lisp/ob-js.el:
* lisp/ob-java.el:
* lisp/ob-io.el (org-babel-prep-session:io)
(org-babel-prep-session:io):
* lisp/ob-hledger.el:
* lisp/ob-haskell.el:
* lisp/ob-groovy.el (org-babel-groovy-wrapper-method)
(org-babel-groovy-evaluate):
* lisp/ob-gnuplot.el:
* lisp/ob-fortran.el (org-babel-expand-body:fortran)
(org-babel-expand-body:fortran):
* lisp/ob-forth.el (org-babel-forth-session-execute):
* lisp/ob-exp.el (ob-exp):
* lisp/ob-eval.el:
* lisp/ob-emacs-lisp.el:
* lisp/ob-ebnf.el:
* lisp/ob-dot.el:
* lisp/ob-ditaa.el:
* lisp/ob-css.el:
* lisp/ob-core.el (org-babel-put-rownames):
* lisp/ob-coq.el:
* lisp/ob-comint.el:
* lisp/ob-calc.el:
* lisp/ob-awk.el:
* lisp/ob-asymptote.el:
* lisp/ob-abc.el:
* lisp/ob-R.el (org-babel-prep-session:R): Formatting fixes.
 2020-02-18 22:57:37 +01:00
Bastien 20ab65482a Merge branch 'maint' 2020-02-11 14:40:17 +01:00
Bastien 713c8d5aba ob-core.el: Respect `org-babel-tangle-uncomment-comments' 
* lisp/ob-core.el (org-babel-expand-noweb-references): Respect
`org-babel-tangle-uncomment-comments'.

Thanks to Immanuel Litzroth for reporting this.
 2020-02-11 14:35:30 +01:00
Nicolas Goaziou c1aed9f809 ob-core: Refactor `org-babel-expand-noweb-references' 
* lisp/ob-core.el (org-babel-expand-noweb-references): Refactor code.
Improve cache handling.
 2020-01-12 11:38:04 +01:00
Nicolas Goaziou 894189fa72 ob-core: Optimize multiple :noweb-ref expansions in a source block 
* lisp/ob-core.el (org-babel-expand-noweb-references): Optimize
multiple :noweb-ref expansions in a source block.
 2020-01-08 23:08:47 +01:00
Kyle Meyer ff5fc050d3 Update copyright year to 2020 2020-01-01 13:38:46 -05:00
Sebastian Miele 0e70e2a42b ob-core: Respect COMMENTed headlines when expanding noweb references 
* lisp/ob-core.el (org-babel-expand-noweb-references): Add calls to
org-in-commented-heading-p where appropriate.
 2019-11-24 10:27:35 +01:00
Kyle Meyer a01a8f55d8 Merge branch 'maint' 2019-10-27 15:55:30 -04:00
Juanma Barranquero 9c611fd8ac Backport commit 41ba8231e from Emacs 
* lisp/ob-scheme.el (org-babel-scheme-get-buffer-impl):
* lisp/ob-shell.el (org-babel--variable-assignments:sh-generic)
(org-babel--variable-assignments:bash_array)
(org-babel--variable-assignments:bash_assoc)
(org-babel--variable-assignments:bash):
* lisp/org-clock.el (org-day-of-week):
(table--put-cell-valign-property): Fix typos.
* lisp/ob-core.el (org-babel-named-src-block-regexp-for-name)
(org-babel-named-data-regexp-for-name): Doc fix.
(org-babel-src-block-names, org-babel-result-names): Fix typos.

lisp/*.el: Fix typos and improve some docstrings
41ba8231ef072571e1a6feabc15d113e5cf57556
Juanma Barranquero
Sun Oct 20 12:12:27 2019 +0200
 2019-10-27 15:54:59 -04:00
Kyle Meyer d215c3a8c0 Merge branch 'maint' 2019-09-29 15:49:08 -04:00
Juanma Barranquero 97feee0469 Backport commit 114323226 from Emacs 
* lisp/ob-C.el (org-babel-prep-session:C)
(org-babel-load-session:C):
* lisp/ob-J.el (org-babel-execute:J):
* lisp/ob-asymptote.el (org-babel-prep-session:asymptote):
* lisp/ob-awk.el (org-babel-execute:awk):
* lisp/ob-core.el (org-babel-process-file-name):
* lisp/ob-ebnf.el (org-babel-execute:ebnf):
* lisp/ob-forth.el (org-babel-execute:forth):
* lisp/ob-fortran.el (org-babel-execute:fortran)
(org-babel-prep-session:fortran, org-babel-load-session:fortran):
* lisp/ob-groovy.el (org-babel-execute:groovy):
* lisp/ob-io.el (org-babel-execute:io):
* lisp/ob-js.el (org-babel-execute:js):
* lisp/ob-lilypond.el (org-babel-default-header-args:lilypond)
(org-babel-lilypond-compile-post-tangle)
(org-babel-lilypond-display-pdf-post-tangle)
(org-babel-lilypond-tangle)
(org-babel-lilypond-execute-tangled-ly)
(org-babel-lilypond-compile-lilyfile)
(org-babel-lilypond-check-for-compile-error)
(org-babel-lilypond-process-compile-error)
(org-babel-lilypond-mark-error-line)
(org-babel-lilypond-parse-error-line)
(org-babel-lilypond-attempt-to-open-pdf)
(org-babel-lilypond-attempt-to-play-midi)
(org-babel-lilypond-switch-extension)
(org-babel-lilypond-set-header-args):
* lisp/ob-lua.el (org-babel-prep-session:lua):
* lisp/ob-picolisp.el (org-babel-execute:picolisp):
* lisp/ob-processing.el (org-babel-prep-session:processing):
* lisp/ob-python.el (org-babel-prep-session:python):
* lisp/ob-scheme.el (org-babel-scheme-capture-current-message)
(org-babel-scheme-execute-with-geiser, org-babel-execute:scheme):
* lisp/ob-shen.el (org-babel-execute:shen):
* lisp/org-agenda.el (org-agenda-entry-types)
(org-agenda-move-date-from-past-immediately-to-today)
(org-agenda-time-grid, org-agenda-sorting-strategy)
(org-agenda-filter-by-category, org-agenda-forward-block):
* lisp/org-faces.el (org-verbatim, org-cycle-level-faces):
* lisp/org-indent.el (org-indent-set-line-properties):
* lisp/org-macs.el (org-get-limited-outline-regexp):
* lisp/org-mobile.el (org-mobile-files):
* lisp/org.el (org-use-fast-todo-selection)
(org-extend-today-until, org-use-property-inheritance)
(org-refresh-effort-properties)
(org-track-ordered-property-with-tag, org-shiftright):
* lisp/ox-html.el (org-html-checkbox-type):
* lisp/ox-man.el (org-man-source-highlight)
(org-man-verse-block):
* lisp/ox-publish.el (org-publish-sitemap-default): Assorted
docfixes.

lisp/*.el: Fix typos and other trivial doc fixes
11432322650830fe9ae365f4113733a79226056d
Juanma Barranquero
Sat Sep 21 00:27:53 2019 +0200
 2019-09-29 15:47:58 -04:00
Nicolas Goaziou df30a056b2 Fix tangling bug when major mode for LANGUAGE is not `LANGUAGE-mode' 
* lisp/ob-core.el (org-babel-expand-noweb-references):
* lisp/ob-tangle.el (org-babel-tangle): Use `org-src-get-lang-mode' so
as to use proper major mode.

Reported-by: immanuel <immanuel.litzroth@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2019-08/msg00272.html>
 2019-08-30 23:36:00 +02:00
Nicolas Goaziou 4848b8b9aa ob: Preserve comma escaping when inserting results 
* lisp/ob-core.el (org-babel-insert-result): Fix typo
* testing/lisp/test-ob.el (test-ob/preserve-comma-escape): New test.

Reported-by: "Berry, Charles" <ccberry@ucsd.edu>
<http://lists.gnu.org/r/emacs-orgmode/2019-08/msg00250.html>
 2019-08-22 10:03:56 +02:00
Joaquín Aguirrezabalaga 4939b41750 ob-core: Fix :dir when :mkdirp is not defined 
* lisp/ob-core.el (org-babel-execute-src-block): Fix behaviour of
  ":dir path" when ":mkdirp" is not defined.
* testing/lisp/test-ob.el (test-ob-core/dir-mkdirp): Add a test case.

TINYCHANGE
 2019-04-25 10:36:40 +02:00
Nicolas Goaziou 64f36561ef Merge branch 'maint' 2019-03-21 21:51:36 +01:00
Sebastian Miele 719887958d ob-core: Add edit-prep in org-babel-make-language-alias 
Nicolas Goaziou <mail@nicolasgoaziou.fr> writes:
> Could you provide a commit message for your patch?

* lisp/ob-core.el (org-babel-make-language-alias): Add edit-prep to
  the list of defalias'ed functions.
 2019-03-21 21:51:12 +01:00
Kyle Meyer c2f3f1912e Merge branch 'maint' 2019-03-17 22:56:24 -04:00
Paul Eggert 602f2280e3 Backport commit 3c94c7bc0 and db9c924d3 from Emacs 
* lisp/ob-core.el (org-babel-string-read):
* lisp/org-agenda.el:
(org-agenda-add-entry-to-org-agenda-diary-file):
* lisp/org-element.el (org-element-keyword-parser):
* lisp/org-list.el (org-list-indent-item-generic):
* lisp/org-mhe.el (org-mhe-get-message-folder-from-index):
* lisp/org-mobile.el (org-mobile-apply):
* lisp/org-mouse.el (org-mouse-context-menu):
* lisp/org-plot.el (org-plot/gnuplot):
* lisp/org-protocol.el (org-protocol-flatten-greedy):
* lisp/org-table.el (org-table-copy-down)
(org-table-formula-make-cmp-string)
(org-table-get-stored-formulas, org-table-recalculate)
(org-table-edit-formulas):
* lisp/org.el (org-translate-link-from-planner)
(org-fill-line-break-nobreak-p):
* lisp/ox-ascii.el (org-ascii-item):
* lisp/ox-latex.el (org-latex-clean-invalid-line-breaks):
* lisp/ox.el (org-export-expand-include-keyword):
Fix regular-expression infelicities and typos.

Fix regular-expression glitches and typos
3c94c7bc02fcacb4a101188dddb0c44d53444178
Paul Eggert
Mon Mar 4 18:00:58 2019 -0800

More regexp corrections and tweaks
db9c924d3d53f46846ad8fd74a5d08f4586a520e
Paul Eggert
Fri Mar 8 09:09:40 2019 -0800

Note(km): These two commits are ported together because, with respect
to Org files, db9c924d3 is a fix of an error from 3c94c7bc0.
 2019-03-17 22:52:27 -04:00
Nicolas Goaziou a486d9cbd7 Move link-related core functions out of "org.el" 
* contrib/lisp/org-wl.el (org-wl-store-link-message):
* lisp/Makefile (clean-install):
* lisp/ob-core.el (org-link-bracket-re):
(org-babel-open-src-block-result):
(org-babel-read-element):
(org-babel-read-link):
(org-babel-result-end):
* lisp/ob-tangle.el (org-link-bracket-re):
(org-babel-tangle-single-block):
(org-link-analytic-bracket-re):
(org-babel-detangle):
(org-babel-tangle-jump-to-org):
* lisp/ol.el:
* lisp/org-agenda.el (org-agenda-get-some-entry-text):
(org-diary):
(org-agenda-format-item):
(org-agenda-open-link):
(org-agenda-switch-to):
(org-agenda-to-appt):
* lisp/org-bbdb.el (org-bbdb-store-link):
* lisp/org-bibtex.el (org-bibtex-store-link):
* lisp/org-capture.el (org-capture-fill-template):
* lisp/org-clock.el (org-clocktable-write-default):
(org-clock-get-table-data):
* lisp/org-compat.el (org-doi-server-url):
(org-email-link-description-format):
(org-make-link-description-function):
(org-from-is-user-regexp):
(org-descriptive-links):
(org-url-hexify-p):
(org-context-in-file-links):
(org-keep-stored-link-after-insertion):
(org-display-internal-link-with-indirect-buffer):
(org-confirm-shell-link-function):
(org-confirm-shell-link-not-regexp):
(org-confirm-elisp-link-function):
(org-confirm-elisp-link-not-regexp):
(org-file-complete-link):
(org-email-link-description):
(org-make-link-string):
(org-store-link-props):
(org-add-link-props):
(org-make-link-regexps):
(org-angle-link-re):
(org-plain-link-re):
(org-bracket-link-regexp):
(org-bracket-link-analytic-regexp):
(org-any-link-re):
* lisp/org-docview.el (org-docview-store-link):
(org-docview-complete-link):
* lisp/org-element.el (org-element-link-parser):
* lisp/org-eshell.el (org-eshell-store-link):
* lisp/org-eww.el (org-eww-store-link):
(org-eww-copy-for-org-mode):
* lisp/org-footnote.el (org-footnote-next-reference-or-definition):
* lisp/org-gnus.el (org-gnus-article-link):
(org-gnus-store-link):
* lisp/org-id.el (org-id-store-link):
* lisp/org-info.el (org-info-store-link):
* lisp/org-irc.el (org-irc-erc-store-link):
* lisp/org-mhe.el (org-mhe-store-link):
* lisp/org-pcomplete.el (pcomplete/org-mode/searchhead):
* lisp/org-protocol.el (org-protocol-do-capture):
* lisp/org-rmail.el (org-rmail-store-link):
* lisp/org-w3m.el (org-w3m-store-link):
(org-w3m-copy-for-org-mode):
 2019-03-10 18:00:27 +01:00
stardiviner 8b5941330b ob-core: Make :mkdirp work for :dir too 
* lisp/ob-core.el (org-babel-execute-src-block): Make directory if
  ":dir path" does not exist when ":mkdirp yes" exist.

* doc/org-manual.org (Header arguments): Document it.

* testing/lisp/test-ob.el: Add a specific testing file for ob-core.el,
  and add a testing for ":mkdir yes" work with :dir header argument
  usage.
 2019-03-04 22:25:48 +01:00
Nicolas Goaziou 0e5e01ba76 Merge branch 'maint' 2019-02-04 18:02:54 +01:00
Nicolas Goaziou 70dde3f617 ob-core: Fix Noweb reference regexp 
* lisp/ob-core.el (org-babel-noweb-wrap): Fix regexp, which could not
  match 2 character long references.  Add docstring.
 2019-02-04 18:02:38 +01:00
Kyle Meyer ba321d0e44 Merge branch 'maint' 2019-01-13 15:14:37 -05:00
Basil L. Contovounesios ede0d19feb Backport commit 2fde6275b from Emacs 
* lisp/ob-core.el (org-babel-insert-result): Use proper-list-p.

Add predicate proper-list-p
2fde6275b69fd113e78243790bf112bbdd2fe2bf
Basil L. Contovounesios
Mon Jul 9 19:00:43 2018 -0700
 2019-01-13 12:43:04 -05:00
Bastien 7a22b8f93b Merge branch 'maint' 2019-01-01 11:54:01 +01:00
Bastien f584d37a67 Update copyright year 2019-01-01 11:50:56 +01:00
Gong Qijian 2b96fc9171 ob-core: Fix `org-babel--string-to-number' 
* lisp/ob-core.el (org-babel--string-to-number): Fix the regular expression.
* testing/lisp/test-ob.el (test-ob/string-to-number): Test cases.

If people write the data in the form "0001"", it means that he wants to
treat it as a string.

TINYCHANGE

> #+name: TBL
> |   id | name   | age |
> |------|--------|-----|
> | 0001 | Apollo |  16 |
> | 0002 | Bmw    |  16 |
>
> #+BEGIN_SRC emacs-lisp :results value pp :var tbl=TBL
> (mapc 'print tbl)
> #+END_SRC
>
> #+RESULTS:
> : (("0001" "Apollo" 16)
> :  ("0002" "Bmw" 16))

TINYCHANGE
 2018-10-13 23:22:05 +02:00
Nicolas Goaziou 1b62a56498 Merge branch 'master' into next 2018-10-06 09:42:04 +02:00
Nicolas Goaziou 5cc69a9ebf Deprecate org-babel-strip-quotes' in favor of org-strip-quotes' 
* lisp/ob-core.el (org-babel-strip-quotes): Remove function.
* lisp/org-macs.el (org-strip-quotes): New function.
* lisp/org-compat.el (org-babel-strip-quotes): Alias for new function.
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-octave.el (org-babel-octave-evaluate-session): Use new function.
 2018-10-06 09:40:33 +02:00
Nicolas Goaziou 26ed66b233 ob: :file and :file-ext no longer imply :results file 
* lisp/ob-core.el (org-babel-execute-src-block): ":results file" must
  be specified in order to return a file.
(org-babel-merge-params): :file and :file-ext no longer imply :results
file.
* testing/lisp/test-ob.el (test-ob/indented-cached-org-bracket-link):
(test-ob/result-file-link-type-header-argument):
(test-ob/result-graphics-link-type-header-argument): Update tests.

Deducing the results from some other arguments is not obvious.
Moreover, it prevents users from setting, e.g., :file-ext, in a node
property, as every block would then create a file.

Reported-by: Alex Fenton <alex@pressure.to>
<http://lists.gnu.org/r/emacs-orgmode/2018-05/msg00469.html>
 2018-10-06 08:56:05 +02:00
Nicolas Goaziou bfd481be42 ob-core: Remove `org-babel-set-current-result-hash' 
* lisp/ob-core.el (org-babel-set-current-result-hash): Remove
  function, unused through the code base.
 2018-10-03 18:44:34 +02:00
Nicolas Goaziou 17edaf8c14 "src block" -> "source block" in documentation and comments 
* etc/ORG-NEWS (Maxima: new headers ~:prologue~ and ~:epilogue~):
(Texinfo exports inline source blocks as ~@code{}~):
(Default lexical evaluation of emacs-lisp source blocks):
* lisp/ob-clojure.el (org-babel-clojure-default-ns):
* lisp/ob-core.el (org-babel-named-src-block-regexp-for-name):
(org-babel-current-src-block-location):
(org-babel-mark-block):
(org-babel-insert-result):
* lisp/ob-emacs-lisp.el (org-babel-default-header-args:emacs-lisp):
* lisp/ob-exp.el (org-babel-exp-process-buffer):
* lisp/ob-lob.el (org-babel-lob-ingest):
* lisp/ob-ref.el:
* lisp/org-element.el (org-element-object-restrictions):
(org-element-src-block-parser):
(org-element-inline-src-block-parser):
* lisp/org-lint.el:
(org-lint--checkers):
* lisp/org-pcomplete.el (pcomplete/org-mode/block-option/src):
* lisp/org-src.el (org-edit-inline-src-code):
* lisp/org.el (org-ctrl-c-ctrl-c):
(org-in-src-block-p):
(org-fill-element):
* lisp/ox-html.el (org-html--textarea-block):
(org-html-format-code):
* lisp/ox-latex.el (org-latex-minted-options):
(org-latex-custom-lang-environments):
* lisp/ox-md.el:
* lisp/ox-odt.el (org-odt-format-code):
* lisp/ox.el (org-export-collect-listings):
* testing/lisp/test-ob-exp.el (ob-exp/src-block-with-affiliated-keyword):
* testing/lisp/test-ob.el (test-ob/preserve-results-indentation):
  Correct "src block" occurrences when they do not specifically refer
  to the element type `src-block'.
 2018-09-20 11:23:49 +02:00
Nicolas Goaziou 318d5bab64 Fix failing test 
* lisp/ob-core.el (org-babel-import-elisp-from-file): Refactor code.
  Fix error when `org-table-to-lisp' return value contains `hline'.
 2018-08-30 23:48:41 +02:00
Nicolas Goaziou 120f871f41 Small refactoring 
* lisp/ob-core.el (org-babel-open-src-block-result): Fix docstring,
  refactor code.
* lisp/org.el (org-open-at-point): Refactor so as to not call
  `org-babel-open-src-block-result' unconditionally.
 2018-07-05 13:15:30 +02:00
Nicolas Goaziou 8e54cafeb2 Fix noweb expansion during export 
* lisp/ob-core.el (org-babel-sha1-hash): Add optional argument to
  specify context.
(org-babel-execute-src-block): Use new argument.
* lisp/ob-exp.el (org-babel-exp-src-block): Use new argument.
(org-babel-exp-results): Fix context.

Reported-by: Ken Mankoff <mankoff@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2018-06/msg00117.html>
 2018-06-23 23:04:45 +02:00
Aaron Ecay 4afb7f747b Update declare-function calls for functions that have moved. 
In cases where functions have moved from org.el into org-macs.el, it
is often possible to replace declare-function by (require 'org-macs)
 2018-05-10 01:04:12 +01:00
Nicolas Goaziou 0dda9bf1c1 Mark `org-get-indentation' as obsolete 
* lisp/org-macs.el (org-get-indentation): Move function...
* lisp/org-compat: ... here.
* lisp/ob-core.el (org-babel-demarcate-block):
(org-babel-insert-result):
(org-babel-update-block-body):
* lisp/ob-exp.el (org-babel-exp-process-buffer):
* lisp/org-agenda.el (org-agenda-get-some-entry-text):
* lisp/org-capture.el (org-capture-place-item):
* lisp/org-clock.el (org-clock-in):
* lisp/org-element.el (org-element-swap-A-B):
* lisp/org-feed.el (org-feed-format-entry):
* lisp/org-indent.el (org-indent-add-properties):
* lisp/org-list.el (org-in-item-p):
(org-list-struct):
(org-list-struct-apply-struct):
(org-list-item-body-column):
(org-toggle-item):
* lisp/org-src.el (org-src--edit-element):
* lisp/org.el (org-fixup-indentation):
(org-cdlatex-environment-indent):
(org--get-expected-indentation):
(org-indent-region):
(org-toggle-fixed-width):
* lisp/ox.el (org-export-expand-include-keyword): Use
  `current-indentation' instead.
 2018-05-09 01:26:31 +02:00
stardiviner b088389c6b ob-core: Add document and test for "graphics" format 
* doc/org-manual.org: Document value.

* lisp/ob-core.el (org-babel-common-header-args-w-values): Handle
  symbol "graphics".

* testing/lisp/test-ob.el (test-ob/result-graphics-link-type-header-argument):
  New test.
 2018-04-12 15:16:04 +02:00
stardiviner 296b0de4e8 ob-core: Add "link" results format 
* lisp/ob-core.el (org-babel-execute-src-block): Handle "link" :results
  format.

* doc/org-manual.org: Add document for new result format "link".

* testing/lisp/test-ob.el (test-ob/result-file-link-type-header-argument):
  New test.
 2018-04-12 15:15:59 +02:00
Nicolas Goaziou 003af466c5 ob-core: Fix failing tests. 
* lisp/ob-core.el (org-babel-result-to-file): Do not assume current
  buffer is visiting a file.
 2018-04-03 00:11:14 +02:00
Nicolas Goaziou bc7b24d0d0 ob-core: Silence byte-compiler 2018-03-13 09:29:50 +01:00
stardiviner 49a8de4ffd
* ob-core.el (org-babel-result-to-file): relative file link result. 
Respect option `org-link-file-path-type`.
 2018-03-06 14:43:22 +08:00
Nicolas Goaziou b420c8e290 ob-core: Fix last commit 
* lisp/ob-core.el (org-babel-execute-src-block): Fix thinko in commit
  122bf2997.
 2018-03-05 14:34:28 +01:00
Nicolas Goaziou 122bf29974 ob-core: Tiny refactoring 
* lisp/ob-core.el (org-babel-execute-src-block): Tiny refactoring.
  Keep lines under 80 columns.
 2018-03-03 10:07:21 +01:00
stardiviner 39bd69b08d
* ob-core.el: (org-babel-execute-src-block) handle :results graphics :file case. 
Don't write result to file if result is graphics.
 2018-03-02 14:22:52 +08:00
Kyle Meyer 47908228e7 Merge branch 'maint' 2018-02-18 16:33:04 -05:00
Glenn Morris 4ddfc6bd69 Backport commit 66a4e651f from Emacs 
; Fix doc typos related to indefinite articles
66a4e651f3cf38c320d1a9d5ae6f88dcc641792b
Glenn Morris
Fri Feb 16 15:16:15 2018 -0500
 2018-02-18 16:32:41 -05:00
Nicolas Goaziou 013941de86 `org-save-outline-visibility' preserve outline, blocks and drawers 
* lisp/org-macs.el (org-save-outline-visibility): Also preserve blocks
  and drawers visibility.  Re-implement without helper functions.
  (org-outline-overlay-data):
  (org-set-outline-overlay-data): Remove functions.
 2018-02-11 11:37:50 +01:00
Nicolas Goaziou e490d2766f Merge branch 'maint' 2018-02-01 15:51:28 +01:00
Nicolas Goaziou b4cc12fc32 ob-core: Fix infloop when filling a region with a source block 
* lisp/ob-core.el (org-babel-do-in-edit-buffer): Do not move point.

Reported-by: Yasushi SHOJI <yasushi.shoji@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2018-02/msg00006.html>
 2018-02-01 15:40:51 +01:00
Nicolas Goaziou 0155441358 Merge branch 'maint' 2018-01-19 18:22:00 +01:00
Tim Landscheidt b289a65be7 Use https for links to orgmode.org 
TINYCHANGE
 2018-01-19 18:14:58 +01:00
Nicolas Goaziou 000b943ebd Re-order visibility functions in "org.el" 
* lisp/org-macs.el (org-outline-overlay-data):
(org-set-outline-overlay-data): Moved from "org.el".
* lisp/org.el (org-remove-empty-overlays-at):
(org-show-empty-lines-in-parent):
(org-files-list):
(org-entry-beginning-position):
(org-entry-end-position):
(org-subtree-end-visible-p):
(org-first-headline-recenter):
(org-flag-region):
(org-show-entry):
(org-show-children):
(org-show-subtree):
(org-hide-block-toggle-maybe):
(org-hide-block-toggle):
(org-hide-block-toggle-all):
(org-hide-block-all):
(org-cycle-hide-drawers):
(org-flag-drawer):
(org-previous-block):
(org-next-block): Move functions.
 2018-01-13 14:15:53 +01:00
Nicolas Goaziou 4dbb4a76a7 Implement `org-show-all' 
* lisp/org.el (org-show-all): New function.
(org-cycle):
(org-cycle-internal-global):
(org-global-cycle):
(org-set-startup-visibility):
(org-set-outline-overlay-data):
(org-hide-block-all):
(org-mode-hook):
(org-tree-to-indirect-buffer):
(org-sort-entries):
(org-mode-map):
(org-org-menu):
* lisp/ob-lilypond.el (org-babel-lilypond-mark-error-line):
* lisp/org-archive.el (org-archive-subtree):
* lisp/org-capture.el (org-capture-place-template):
* lisp/org-mouse.el (org-mouse-popup-global-menu):
* lisp/ox-org.el (org-org-publish-to-org):
* testing/org-test.el (org-test-at-id):
(org-test-in-example-file): Use new function.

* lisp/org-compat.el (org-show-block-all): Mark as obsolete.
 2018-01-10 15:58:21 +01:00
Kyle Meyer d94f7024bc Merge branch 'maint' 2018-01-07 00:28:35 -05:00
Kyle Meyer 3e1641ef0a Update copyright years 2018-01-07 00:27:54 -05:00
Nicolas Goaziou e9f30779de Merge branch 'maint' 2017-12-31 15:49:55 +01:00
Nicolas Goaziou af58a6dbf7 Change Org-mode into Org mode 
* lisp/ob-core.el (org-babel-result-to-file):
* lisp/ob-picolisp.el:
* lisp/org-agenda.el (org-check-for-org-mode):
(org-search-view):
(org-tags-view):
(org-agenda-cleanup-fancy-diary):
(org-agenda-get-day-entries):
* lisp/org-table.el (orgtbl-mode):
* lisp/org-w3m.el (org-w3m-copy-for-org-mode):
* lisp/org.el (org-modules):
(org-startup-options):
(org-fontify-meta-lines-and-blocks):
* mk/default.mk:
* mk/manfull.pl:
* mk/org-fixup.el (org-make-org-version):
(org-make-org-loaddefs):
* mk/orgcard2txt.pl (rep_esc):
* mk/targets.mk ($(info):
* testing/README:
(Example):
* testing/examples/no-heading.org:
* testing/examples/normal.org: Change Org-mode into Org mode
 2017-12-31 15:48:09 +01:00
Nicolas Goaziou 4d3e7a2a57 ob-core: All Noweb parameters are read at point of definition 
* lisp/ob-core.el (org-babel-params-from-properties): Do not force
  using `org-babel-current-src-block-location'.  Extract properties
  from point.
(org-babel--noweb-reference): Remove function.
(org-babel-expand-noweb-references): Apply function removal.  Small
refactoring.
* lisp/ob-lob.el (org-babel-lob-get-info): Small refactoring.
 2017-12-23 15:56:53 +01:00
Nicolas Goaziou 38be851245 ob-core: Do not always evaluate Lisp code in parameters 
* lisp/ob-core.el (org-babel-get-src-block-info):
(org-babel-params-from-properties):
(org-babel-parse-header-arguments): Add optional argument disabling
Lisp evaluation in parameters.
 2017-12-23 15:45:03 +01:00
Nicolas Goaziou 1e40dd6486 ob-core: Tiny refactoring 
* lisp/ob-core.el (org-babel-expand-noweb-references): Tiny
  refactoring.
 2017-12-23 14:03:52 +01:00
Nicolas Goaziou 774e553f11 Merge branch 'maint' 2017-12-23 14:03:47 +01:00
Nicolas Goaziou d9125e435f Fix recursive Noweb expansion 
* lisp/ob-core.el (org-babel-expand-noweb-references): Recursive Noweb
  expansion obey to :noweb parameter.
* testing/lisp/test-ob.el (test-ob/noweb-expansion): Add tests.

Fixes: 17523
 2017-12-23 13:58:25 +01:00
Nicolas Goaziou 3acc212c8f ob-core: Get :noweb-ref from definition instead of point of call 
* lisp/ob-core.el (org-babel-expand-noweb-references): Get :noweb-ref
  from definition instead of point of call.

* testing/lisp/test-ob.el (test-ob/noweb-expansion-1):
(test-ob/noweb-expansion-2): Merge tests.  Add test.
 2017-12-20 13:15:08 +01:00
Nicolas Goaziou 291d90c53e ob-core: Correctly find Noweb reference 
* lisp/ob-core.el (org-babel--noweb-reference): New function.
(org-babel-expand-noweb-references): Use new function.
 2017-12-20 13:01:53 +01:00
Nicolas Goaziou 2646271789 Merge branch 'maint' 2017-12-15 22:26:01 +01:00
Nicolas Goaziou 46124812d2 Fix function declarations 
Fixes: 29722
 2017-12-15 22:24:44 +01:00
Nicolas Goaziou fc5abc2d55 ob-core: Insert lowercase results 
* lisp/ob-core.el (org-babel-insert-result): Insert lower case blocks
  and drawers.

* testing/lisp/test-ob.el (test-ob/org-babel-remove-result--results-wrap):
(test-ob/org-babel-remove-result--results-org):
(test-ob/org-babel-remove-result--results-html):
(test-ob/org-babel-remove-result--results-latex):
(test-ob/org-babel-remove-result--results-code): Update tests.
 2017-12-10 23:05:32 +01:00
Nicolas Goaziou 819b2a1a3d Merge branch 'maint' 2017-11-28 23:59:21 +01:00
Nicolas Goaziou b4b2809eb1 ob-core: Fix `org-babel-src-block-names' 
* lisp/ob-core.el (org-babel-src-block-names): Do not change
  visibility or windows when called.
 2017-11-28 23:57:18 +01:00
Nicolas Goaziou e92732efd0 Merge branch 'maint' 2017-11-28 23:35:44 +01:00
Nicolas Goaziou ebe9eb2423 ob-core: Fix last commit 
* lisp/ob-core.el (org-babel-result-end): Add missing `example-block'
  result type.
 2017-11-28 23:35:01 +01:00
Nicolas Goaziou c1d7b2cda3 Merge branch 'maint' 2017-11-27 23:26:38 +01:00
Nicolas Goaziou d7940ae2a7 ob-core: Fix removal of elements after RESULTS 
* lisp/ob-core.el (org-babel-result-end): Ignore elements that do not
  correspond to a valid result type (e.g., a headline).

Fixes commit 1d8126385c.

Reported-by: Kaushal Modi <kaushal.modi@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2017-11/msg00384.html>
 2017-11-27 23:23:04 +01:00
Nicolas Goaziou be1e807942 Merge branch 'maint' 2017-11-25 21:13:58 +01:00
Nicolas Goaziou 1d8126385c ob-core: Fix results removal without blank line between source and results 
* lisp/ob-core.el (org-babel-remove-result): Delete blank lines before
  results.
(org-babel-result-end): Use `org-element-at-point'.
* testing/lisp/test-ob.el (test-ob-verify-result-and-removed-result):
  Remove duplicate.
* testing/lisp/test-ob.el (test-ob/org-babel-remove-result--no-blank-line):
  New test.
* testing/lisp/test-ob.el (test-ob/results-in-narrowed-buffer): Small
  refactoring.

Reported-by: Ken Mankoff <mankoff@gmail.com>
<http://lists.gnu.org/archive/html/emacs-orgmode/2017-11/msg00338.html>
 2017-11-25 21:07:52 +01:00
Nicolas Goaziou 99dbca3d4f Remove `org-babel-use-quick-and-dirty-noweb-expansion' 
* lisp/ob-core.el (org-babel-use-quick-and-dirty-noweb-expansion):
  Remove variable.
(org-babel-expand-noweb-references): Update function.

* doc/org.texi (noweb-ref): Document new behaviour.
(Noweb reference syntax): Delete reference to removed variable.

`org-babel-use-quick-and-dirty-noweb-expansion' main use is to speed
up Noweb expansion when expanding only by name.  By distinguishing
name and reference expansion, we no longer need this variable.  In the
first case, the expansion is quicker anyway, and in the second case,
we most certainly need an accurate expansion.
 2017-10-26 13:09:23 +02:00
Paul Eggert ff0dcf52a5 Backport commit bc511a64f from Emacs 
Prefer HTTPS to FTP and HTTP in documentation
bc511a64f6da9ab51acc7c8865e80c4a4cb655c2
Paul Eggert
Wed Sep 13 15:54:37 2017 -0700
 2017-09-17 00:28:38 -04:00
Nicolas Goaziou b16086d9af Fix org-confirm-babel-evaluate' with org-sbe' 
* lisp/ob-core.el (org-babel-check-confirm-evaluate): Do not move
  point, as it is neither necessary nor expected by
  `org-babel-check-confirm-evaluate'.

Reported-by: Alex Bennée <alex.bennee@linaro.org>
http://lists.gnu.org/archive/html/emacs-orgmode/2017-09/msg00167.html
 2017-09-07 17:43:32 +02:00
Nicolas Goaziou ea4e3dac6d Use split-string' instead of org-split-string' 
* contrib/lisp/org-depend.el (org-depend-trigger-todo):
(org-depend-block-todo):
* contrib/lisp/ox-bibtex.el (org-bibtex-get-arguments):
* contrib/lisp/ox-koma-letter.el (org-koma-letter-template):
* contrib/lisp/ox-taskjuggler.el (org-taskjuggler--build-unique-id):
(org-taskjuggler-resolve-dependencies):
* lisp/ob-core.el (org-babel-insert-result):
* lisp/org-agenda.el (org-search-view):
* lisp/org-lint.el (org-lint-duplicate-target):
(org-lint-wrong-header-value):
* lisp/org.el (org--setup-collect-keywords):
(org-make-org-heading-search-string):
(org-search-radio-target):
(org-local-logging):
(org-entry-add-to-multivalued-property):
(org-entry-remove-from-multivalued-property):
(org-entry-member-in-multivalued-property):
(org-entry-get-multivalued-property):
(org-entry-put-multivalued-property):
(org-wrap):
* lisp/ox-beamer.el (org-beamer-allowed-property-values):
* lisp/ox.el (org-export--get-subtree-options):
(org-export--get-inbuffer-options): Use `split-string' instead of
`org-split-string'.
 2017-09-07 14:36:50 +02:00
Nicolas Goaziou dd4a3d3b11 Merge branch 'maint' 2017-08-25 22:00:38 +02:00
Nicolas Goaziou 21a8ec1c0f ob-core: Fix going to a named block. 
* lisp/ob-core.el (org-babel-find-named-block): Add missing argument.

Reported-by: Eric S Fraga <ucecesf@ucl.ac.uk>
<http://lists.gnu.org/archive/html/emacs-orgmode/2017-08/msg00576.html>
 2017-08-25 21:59:28 +02:00
Nicolas Goaziou 548b07741b Merge branch 'maint' 2017-08-13 19:02:27 +02:00
Nicolas Goaziou b862c24b9f ob-core: Fix `org-babel-goto-named-src-block' at point-min 
* lisp/ob-core.el (org-babel-find-named-block):
(org-babel-src-block-names): Fix behaviour when match is at point-min.

Reported-by: "Berry, Charles" <ccberry@ucsd.edu>
<http://lists.gnu.org/archive/html/emacs-orgmode/2017-08/msg00324.html>
 2017-08-13 19:02:10 +02:00
Nicolas Goaziou 15e992c6da Merge branch 'maint' 2017-08-13 16:21:21 +02:00
Nicolas Goaziou 24a76fbe57 ob-core: Fix improper results indentation 
* lisp/ob-core.el (org-babel-insert-result): Fix improper results
  indentation.
* testing/lisp/test-ob.el (test-ob/preserve-results-indentation): Add
  test.

Reported-by: Chunyang Xu <mail@xuchunyang.me>
<http://lists.gnu.org/archive/html/emacs-orgmode/2017-08/msg00308.html>
 2017-08-13 16:20:20 +02:00
Nicolas Goaziou f776e65373 Move `org-split-string' to "org-macs.el" 
* lisp/org.el (org-split-string): Move the function...
* lisp/org-macs.el (org-split-string): ... here.  Also clarify
  docstring with regards to `split-string'.
 2017-07-27 13:39:52 +02:00
Nicolas Goaziou 93b5e5087f Merge branch 'maint' 2017-05-08 11:26:33 +02:00
Nicolas Goaziou f1da21f7d9 ob-core: Fix regression 
* lisp/ob-core.el (org-babel-balanced-split): Fix regression
  introduced in 500abcd7fb.

* testing/lisp/test-ob.el (test-ob/balanced-split): Add tests.

Reported-by: Eric S Fraga <e.fraga@ucl.ac.uk>
<http://permalink.gmane.org/gmane.emacs.orgmode/113401>
 2017-05-08 11:25:17 +02:00
Nicolas Goaziou cecdb2bd67 Merge branch 'maint' 2017-05-02 08:24:24 +02:00
Nicolas Goaziou 500abcd7fb ob-core: Fix `org-babel-balanced-split' 
* lisp/ob-core.el (org-babel-balanced-split): Rewrite function.

Reported-by: Moritz Heidkamp <moritz@twoticketsplease.de>
<http://permalink.gmane.org/gmane.emacs.orgmode/113204>
 2017-05-01 23:35:39 +02:00
Nicolas Goaziou 823c821bc8 ob-core: Small refactoring 
* lisp/ob-core.el (org-babel-read): Small refactoring.
(org-babel--string-to-number): Use `string-match-p' instead of
`string-match'.
* lisp/org-compat.el (org-babel-number-p): Move obsolete alias.
 2017-05-01 15:33:09 +02:00
Nicolas Goaziou 6251c87f66 Merge branch 'maint' 2017-03-01 22:19:29 +01:00
Nicolas Goaziou a4eb60931a ob-core: Properly escape Org syntax when inserting results 
* lisp/ob-core.el (org-babel-examplify-region): Escape Org syntax
  before wrapping it.

* testing/lisp/test-ob.el (test-ob/org-babel-insert-result): Add test.
  Renamed from `test-ob/org-babel-insert-result--improper-lists'.

Reported-by: D M German <dmg@turingmachine.org>
 2017-03-01 22:19:04 +01:00
Kyle Meyer 9c111f63d3 ob-core: Add org-babel-uppercase-example-markers option 
* lisp/ob-core.el (org-babel-capitalize-example-region-markers): Mark
as obsolete.
(org-babel-uppercase-example-markers): New defcustom to replace defvar
org-babel-capitalize-example-region-markers.
(org-babel-examplify-region): Use new option.

Rather than moving org-babel-capitalize-example-region-markers to a
defcustom, give the option a new name that makes it clearer that all
characters, not just the first, will be in upper case.

Suggested-by: Vicente Vera <vicentemvp@gmail.com>
<http://permalink.gmane.org/gmane.emacs.orgmode/111656>
 2017-01-26 20:06:39 -05:00
Kyle Meyer 7c710f6f57 Change :version in defcustoms from "25.2" to "26.1" 
* lisp/ob-J.el (org-babel-J-command):
* lisp/ob-core.el (org-babel-hash-show-time):
* lisp/ob-exp.el (org-babel-exp-inline-code-template):
* lisp/ob-lisp.el (org-babel-lisp-eval-fn):
* lisp/org-agenda.el (org-agenda-view-columns-initially):
* lisp/org-attach.el (org-attach-commit):
(org-attach-archive-delete):
(org-attach-annex-auto-get):
* lisp/org-bibtex.el (org-bibtex-inherit-tags):
* lisp/org-clock.el (org-clock-into-drawer):
* lisp/org-colview.el (org-columns-summary-types):
* lisp/org-faces.el (org-block):
* lisp/org-src.el (org-src-block-faces):
* lisp/org-table.el (org-table-copy-increment):
(org-table-formula-create-columns):
(org-table-convert-region-max-lines):
* lisp/org-timer.el (org-timer-default-timer):
* lisp/org.el (org-export-backends):
(org-show-context-detail):
(org-cycle-hook):
(org-occur-case-fold-search):
(org-preview-latex-default-process):
(org-preview-latex-process-alist):
(org-preview-latex-image-directory):
(org-latex-default-packages-alist):
(org-sparse-tree-default-date-type):
(org-structure-template-alist):
(org-effort-durations):
(org-agenda-ignore-properties): Change :version from "25.2" to "26.1".
(customize-package-emacs-version-alist): Fix associations between Org
and Emacs releases.
* lisp/ox-ascii.el (org-ascii-list-margin):
* lisp/ox-beamer.el (org-beamer-subtitle-format):
* lisp/ox-html.el (org-html-format-headline-function):
(org-html-format-inlinetask-function):
(org-html-viewport):
* lisp/ox-latex.el (org-latex-caption-above):
(org-latex-prefer-user-labels):
(org-latex-subtitle-format):
(org-latex-hyperref-template):
(org-latex-footnote-defined-format):
(org-latex-images-centered):
(org-latex-default-figure-position):
(org-latex-text-markup-alist):
(org-latex-format-inlinetask-function):
(org-latex-custom-lang-environments):
(org-latex-compiler-file-string):
(org-latex-compiler):
(org-latex-bib-compiler):
(org-latex-logfiles-extensions):
(org-latex-known-warnings):
* lisp/ox-md.el (org-md-footnotes-section):
(org-md-footnote-format):
* lisp/ox-odt.el (org-odt-format-headline-function):
(org-odt-format-inlinetask-function):
(org-odt-inline-image-rules):
* lisp/ox-texinfo.el (org-texinfo-format-headline-function):
* lisp/ox.el (org-export-with-creator):
(org-export-with-title):
(org-export-with-broken-links):
(org-export-copy-to-kill-ring): Change :version from "25.2" to "26.1".

It looks like the goal is to sync Org 9.0.* (maint) with the Emacs
master branch (what will be version 26.1):
https://lists.gnu.org/archive/html/emacs-orgmode/2017-01/msg00558.html
 2017-01-26 00:02:03 -05:00
Kyle Meyer ffa4502771 ob-core: Move org-babel-local-file-name to org-compat.el 
* lisp/ob-core.el (org-babel-process-file-name): Move to
org-compat.el.
* lisp/org-compat.el (org-babel-local-file-name): Add compatibility
alias.
 2017-01-25 22:00:48 -05:00
Michael Albinus e97f04de8e Backport commit 22946702b from Emacs 
* lisp/ob-core.el (org-babel-local-file-name): Use `file-local-name'
when available.

22946702b4296c0e42e4baf6221e205b52d05cbf
Michael Albinus
Sun Nov 20 16:29:47 2016 +0100
 2017-01-25 22:00:48 -05:00
Kyle Meyer 713f785017 Update copyright years 2017-01-05 20:19:37 -05:00
Nicolas Goaziou 4c4e843319 ob-core: Fix typos in messages 
* lisp/ob-core.el (org-babel-check-evaluate):
(org-babel-confirm-evaluate): Fix typos.
 2016-11-04 08:34:57 +01:00
Nicolas Goaziou 0d97a96c62 ob-core: Fix typo 
* lisp/ob-core.el (org-babel--get-vars): Fix typo.
 2016-11-03 12:45:30 +01:00
Nicolas Goaziou 6ca5cc8efb Better integration between Babel and `C-c C-c' 
* lisp/org.el (org-ctrl-c-ctrl-c): Handle Babel context without relying
  to user hooks.
* lisp/ob-core.el (org-babel-execute-maybe):
(org-babel-hash-at-point): Do not functions in `C-c C-c' hook.
 2016-10-19 16:08:09 +02:00
Nicolas Goaziou 0cf58cc208 Improve docstrings 
* lisp/ob-core.el (org-confirm-babel-evaluate):
(org-babel-no-eval-on-ctrl-c-ctrl-c):
(org-babel-hash-at-point):
* lisp/org-agenda.el (org-agenda-custom-commands):
(org-stuck-projects):
(org-agenda):
(org-timeline):
(org-todo-list):
(org-agenda-filter-by-tag):
(org-agenda-log-mode):
(org-agenda-refile):
(org-agenda-show-and-scroll-up):
(org-agenda-tree-to-indirect-buffer):
(org-agenda-show-the-flagging-note):
(org-agenda-to-appt):
* lisp/org-capture.el (org-capture-mode):
(org-capture-use-agenda-date):
(org-capture):
* lisp/org-clock.el (org-clock-in):
(org-clock-display):
* lisp/org-colview.el (org-columns--display-here):
(org-columns):
* lisp/org-footnote.el (org-footnote-section):
* lisp/org-gnus.el (org-gnus-prefer-web-links):
* lisp/org-lint.el (org-lint):
* lisp/org-list.el (org-plain-list-ordered-item-terminator):
(org-list-allow-alphabetical):
(org-list-automatic-rules):
(org-list-use-circular-motion):
* lisp/org-protocol.el (org-protocol-store-link):
(org-protocol-create-for-org):
* lisp/org-src.el (org-src-preserve-indentation):
(org-edit-src-content-indentation):
(org-src-mode-hook):
(org-src-mode):
(org-edit-table.el):
(org-edit-export-block):
(org-edit-src-code):
(org-edit-fixed-width-region):
* lisp/org-table.el (org-table-automatic-realign):
(org-table-copy-increment):
(org-table-formula-evaluate-inline):
(org-table-allow-automatic-line-recalculation):
(org-table-edit-field):
(orgtbl-ascii-plot):
* lisp/org-timer.el (org-timer):
* lisp/org.el (org-deadline-string):
(org-comment-string):
(org-ellipsis):
(org-show-context-detail):
(org-indirect-buffer-display):
(org-cycle-global-at-bob):
(org-insert-heading-respect-content):
(org-enable-table-editor):
(org-context-in-file-links):
(org-display-internal-link-with-indirect-buffer):
(org-file-apps):
(org-refile-targets):
(org-todo-keywords):
(org-use-fast-todo-selection):
(org-treat-insert-todo-heading-as-state-change):
(org-time-clocksum-use-fractional):
(org-time-clocksum-use-effort-durations):
(org-agenda-files):
(org-cycle-hide-archived-subtrees):
(org-cycle):
(org-global-cycle):
(org-tree-to-indirect-buffer):
(org-insert-heading):
(org-store-link):
(org-insert-link):
(org-mark-ring-push):
(org-refile):
(org-todo):
(org-show-todo-tree):
(org-reveal):
(org-check-deadlines):
(org-switchb):
(org-cdlatex-mode):
(org-toggle-latex-fragment):
(org-ctrl-c-ctrl-c):
(org-toggle-heading):
(org-indent-line):
(org-yank):
(org-speedbar-set-agenda-restriction):
* lisp/ox-html.el (org-html-htmlize-output-type):
* lisp/ox-icalendar.el (org-icalendar-combined-agenda-file):
* lisp/ox-publish.el (org-publish-project-alist):
* lisp/ox.el (org-export-in-background):
(org-export-stack-mode):
(org-export--stack-source-at-point):
(org-export-dispatch): Improve quotes and formatting in docstrings.
 2016-10-15 17:43:54 +02:00
Nicolas Goaziou 2116162fe6 ob-core: Prevent spurious blanks lines when executing code 
* lisp/ob-core.el (org-babel--insert-results-keyword):
(org-babel-where-is-src-block-result): Control better the number of
empty lines around results of a source block evaluation.

* testing/lisp/test-ob.el (test-ob/blocks-with-spaces): Add tests.
(test-ob/specific-colnames): Fix test.
 2016-10-07 23:56:37 +02:00
Nicolas Goaziou 29830f7214 ob-core: Make `org-babel-hash-show-time' a defcustom 
* lisp/ob-core.el (org-babel-hash-show-time): Change into a defcustom.
 2016-10-01 10:35:14 +02:00
Nicolas Goaziou 9d7d650cd7 ob-core: Fix hash with time stamp 
* lisp/ob-core.el (org-babel-result-regexp): Fix regexp.
(org-babel--insert-results-keyword): Simplify format-string.
(org-babel--clear-results-maybe): Fix return value.

* testing/lisp/test-ob.el (test-ob/where-is-src-block-result): Add
  tests.

Reported-by: Thomas Alexander Gerds <tag@biostat.ku.dk>
<http://permalink.gmane.org/gmane.emacs.orgmode/109418>
 2016-10-01 10:30:53 +02:00
Aaron Ecay 140aacbf2f Use ‘eq’ instead of ‘equal’ for symbols 
* lisp/ob-C.el (org-babel-C-val-to-C-type):
* lisp/ob-core.el (org-babel-get-colnames):
(org-babel-disassemble-tables):
* lisp/ob-lua.el (org-babel-lua-var-to-lua):
(org-babel-lua-table-or-string):
* lisp/ob-python.el (org-babel-python-var-to-python):
(org-babel-python-table-or-string):
* lisp/ob-ruby.el (org-babel-ruby-var-to-ruby):
(org-babel-ruby-table-or-string):
* lisp/ob-shell.el (org-babel-sh-var-to-string):
* lisp/ob-sqlite.el (org-babel-sqlite-table-or-scalar):
* lisp/org-agenda.el (org-agenda-prepare-window):
(org-compile-prefix-format):
* lisp/org-bibtex.el (org-bibtex-headline):
* lisp/org-capture.el (org-capture):
* lisp/org-colview.el (org-columns-next-allowed-value):
* lisp/org-mhe.el (org-mhe-store-link):
(org-mhe-get-message-real-folder):
(org-mhe-get-message-folder):
(org-mhe-get-message-num):
(org-mhe-get-header):
(org-mhe-follow-link):
* lisp/org-table.el (org-define-lookup-function):
* lisp/org.el (format-spec):
* lisp/ox-odt.el (org-odt--translate-description-lists):
* lisp/ox-publish.el (org-publish-compare-directory-files):
Use `eq' instead of `equal' when comparing to symbols.
* lisp/org-timer.el (org-timer-set-mode-line):
* lisp/org-capture.el (org-capture-finalize):
Use `cl-case' instead of `(cond ((eq x 'foo) ...) ...)'.
 2016-09-25 16:29:06 +01:00
Aaron Ecay 48e7f17bc6 Use assq instead of assoc with quoted symbols 
* lisp/ob-core.el (org-babel-merge-params):
* lisp/org-agenda.el (org-agenda-prepare-window):
(org-agenda-to-appt):
* lisp/org-capture.el (org-capture-finalize):
* lisp/org.el (org-find-invisible-foreground):
(org-open-file):
(org-todo-trigger-tag-changes):
(org-back-over-empty-lines):
* lisp/ox-odt.el (org-odt-get-table-cell-styles):
Use assq instead of assoc with quoted symbols.
 2016-09-23 11:20:55 +01:00
Aaron Ecay 79650ffbbd Use assq instead of assoc for :keywords 
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-J.el (org-babel-execute:J):
* lisp/ob-R.el (org-babel-edit-prep:R):
(org-babel-expand-body:R):
(org-babel-execute:R):
(org-babel-variable-assignments:R):
(org-babel-R-initiate-session):
* lisp/ob-abc.el (org-babel-execute:abc):
* lisp/ob-asymptote.el (org-babel-execute:asymptote):
* lisp/ob-awk.el (org-babel-execute:awk):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
(org-babel-execute:clojure):
* lisp/ob-core.el (org-babel-expand-body:generic):
(org-babel-load-in-session):
(org-babel-initiate-session):
(org-babel-open-src-block-result):
(org-babel-process-params):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
* lisp/ob-ditaa.el (org-babel-execute:ditaa):
* lisp/ob-dot.el (org-babel-execute:dot):
* lisp/ob-ebnf.el (org-babel-execute:ebnf):
* lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp):
(org-babel-execute:emacs-lisp):
* lisp/ob-exp.el (org-babel-exp-process-buffer):
(org-babel-exp-do-export):
(org-babel-exp-code):
* lisp/ob-forth.el (org-babel-execute:forth):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-gnuplot.el (org-babel-gnuplot-process-vars):
(org-babel-expand-body:gnuplot):
(org-babel-execute:gnuplot):
* lisp/ob-groovy.el (org-babel-execute:groovy):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-io.el (org-babel-execute:io):
* lisp/ob-java.el (org-babel-execute:java):
* lisp/ob-js.el (org-babel-execute:js):
* lisp/ob-latex.el (org-babel-execute:latex):
* lisp/ob-ledger.el (org-babel-execute:ledger):
* lisp/ob-lilypond.el (org-babel-lilypond-process-basic):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
(org-babel-execute:lisp):
* lisp/ob-lua.el (org-babel-execute:lua):
* lisp/ob-maxima.el (org-babel-execute:maxima):
* lisp/ob-mscgen.el (org-babel-execute:mscgen):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-execute:octave):
* lisp/ob-org.el (org-babel-execute:org):
* lisp/ob-perl.el (org-babel-execute:perl):
* lisp/ob-picolisp.el (org-babel-execute:picolisp):
* lisp/ob-plantuml.el (org-babel-execute:plantuml):
* lisp/ob-python.el (org-babel-execute:python):
* lisp/ob-ruby.el (org-babel-execute:ruby):
* lisp/ob-sass.el (org-babel-execute:sass):
* lisp/ob-scala.el (org-babel-execute:scala):
* lisp/ob-scheme.el (org-babel-execute:scheme):
* lisp/ob-screen.el (org-babel-execute:screen):
(org-babel-prep-session:screen):
* lisp/ob-shell.el (org-babel-execute:shell):
(org-babel-variable-assignments:shell):
(org-babel-sh-evaluate):
* lisp/ob-shen.el (org-babel-execute:shen):
* lisp/ob-sql.el (org-babel-execute:sql):
* lisp/ob-sqlite.el (org-babel-execute:sqlite):
* lisp/ob-tangle.el (org-babel-tangle):
(org-babel-tangle-single-block):
* lisp/org-src.el (org-src-associate-babel-session):
* lisp/org.el (org-next-link):
Use `assq' instead of `assoc' with :keyword keys.
 2016-09-23 11:20:09 +01:00
Kyle Meyer 7cb0decdc7 Merge branch 'maint' 2016-09-18 11:30:18 -04:00
Michael Albinus f46b92df92 Backport commit 2c05061 from Emacs 
* lisp/ob-core.el (org-babel-local-file-name): Use `file-remote-p'.

Add `make-nearby-temp-file' and `temporary-file-directory'
2c0506173d92dd9d6de409a045668c6b5cf1fcef
Michael Albinus
Sun Aug 7 13:57:23 2016 +0200
 2016-09-18 11:10:41 -04:00
Aaron Ecay d350baf2db babel: change single-armed ‘if’ statements to ‘when’ 
* lisp/ob-comint.el (org-babel-comint-eval-invisibly-and-wait-for-file):
* lisp/ob-core.el (org-babel-initiate-session):
(org-babel-hide-result-toggle):
(org-babel-insert-result):
* lisp/ob-eval.el (org-babel--shell-command-on-region):
* lisp/ob-table.el (org-babel-table-truncate-at-newline):
* lisp/ob-tangle.el (org-babel-tangle):
Change `if' without else to `when'.
 2016-09-03 02:45:27 +01:00
Aaron Ecay a3adfb062b Introduce new function for removing paired delimiters from string. 
* lisp/org-macs.el (org-unbracket-string): New function.
* lisp/ob-core.el (org-babel-strip-quotes):
* lisp/ob-lua.el (org-babel-lua-read-string):
* lisp/ox-beamer.el (org-beamer--normalize-argument): Use it.
 2016-09-03 01:55:45 +01:00
Aaron Ecay 79999af264 ob-core: Rename and refactor a function 
* lisp/ob-core.el (org-babel--string-to-number): Rename and refactor
from `org-babel-number-p'.
(org-babel-read-element, org-babel-read): Apply renaming.

The old name implies that the function is a predicate, but it’s actually
a type conversion function.
 2016-09-03 01:52:27 +01:00
Aaron Ecay 890ed78c0d babel: replace org-babel-*-read-string functions with single version. 
* lisp/ob-core.el (org-babel-strip-quotes): New function.
* lisp/ob-haskell.el (org-babel-haskell-read-string): Remove.
(org-babel-execute:haskell): Use new function.
* lisp/ob-octave.el (org-babel-octave-read-string): Remove.
(org-babel-octave-evaluate-session): Use new function.
* lisp/ob-ruby.el (org-babel-ruby-read-string): Remove.
 2016-09-01 16:57:57 +01:00
Nicolas Goaziou 3b3fc520aa Fix coderef handling in source blocks 
* lisp/ob-core.el (org-babel--normalize-body): Do not remove coderef.
(org-babel-get-src-block-info): Add coderef label information, when
available, to the return value.
(org-babel-execute-src-block): Expand noweb and remove coderefs
non-destructively.
* lisp/ob-lob.el (org-babel-lob-get-info): Adapt to new INFO.

* testing/lisp/test-ob-exp.el (ob-export/body-with-coderef):
* testing/lisp/test-ob.el (test-ob/evaluate-body-with-coderefs): Add
  tests.

Reported-by: Thibault Marin <thibault.marin@gmx.com>
<http://permalink.gmane.org/gmane.emacs.orgmode/108888>
 2016-08-28 11:56:14 +02:00
Aaron Ecay 6b52bc6a21 Clean up string handling. 
* lisp/org-compat.el (string-prefix-p, string-suffix-p):
Add compatibility definitions for 24.3.

* lisp/ob-R.el (org-babel-edit-prep:R):
* lisp/ob-core.el (org-babel-demarcate-block):
* lisp/ob-js.el (org-babel-js-read):
* lisp/ob-latex.el (org-babel-execute:latex):
* lisp/ob-ref.el (org-babel-ref-parse):
* lisp/ob-shell.el (org-babel-variable-assignments:shell):
* lisp/org-protocol.el (org-protocol-create):
* lisp/org-table.el (org-table-field-info):
* lisp/org.el (org-get-buffer-for-internal-link):
* lisp/ox-publish.el (org-publish-compare-directory-files):
* lisp/ox-texinfo.el (org-texinfo-template):
Use `string-{suffix,prefix}-p' instead of `string-match(-p)'.

* lisp/ob-python.el (org-babel-python-read-string):
Ditto, also use `substring' rather than `match-string'.

* lisp/org-table.el (org-table-copy-down):
(org-table-insert-hline, org-table-current-field-formula):
(org-table-get-formula): Use `string-match-p' instead of
`string-match'.
 2016-08-24 16:05:54 +01:00
Nicolas Goaziou de24694f05 Turn org-mode into Org or Org mode 
Use Org or Org mode instead of org-mode or Org-mode according to
"Documentation standards".
 2016-08-23 22:13:56 +02:00
Nicolas Goaziou 190476e3e0 ob-core: Silence byte-compiler 2016-08-18 15:23:00 +02:00
Nicolas Goaziou 48af4166fd Consider edit buffers in `org-src-coderef-regexp' 
* lisp/org-src.el (org-src-coderef-format): New function
(org-src-coderef-regexp): Change signature.

* lisp/ob-core.el (org-babel--normalize-body):
* lisp/ox.el (org-export-unravel-code): Use new functions.

* testing/lisp/test-org-src.el (test-org-src/coderef-format): New test.
 2016-08-17 23:43:38 +02:00
Nicolas Goaziou 48a8748aef ob-core: Silence byte-compiler 2016-08-08 22:01:57 +02:00
Nicolas Goaziou 9f47b37231 Ignore coderef labels when evaluating a code block 
* lisp/ob-core.el (org-babel--normalize-body): New function.
(org-babel-get-src-block-info): Use new function.

* lisp/org-src.el (org-src-coderef-regexp): New function.
* lisp/ox.el (org-export-unravel-code): Use new function.

* testing/lisp/test-ob.el (test-ob/evaluate-body-with-coderefs): New
  test.
 2016-08-08 14:04:11 +02:00
Nicolas Goaziou 9b5f964d71 ob-core: Tiny refactoring 
* lisp/ob-core.el (org-babel-get-src-block-info): Tiny refactoring.
 2016-08-08 13:13:11 +02:00
Nicolas Goaziou c4da20a2f3 Silence byte-compiler 
* lisp/ob-core.el (org-babel-process-params): Silence byte-compiler.
* lisp/ob-groovy.el (org-babel-groovy-evaluate):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-io.el (org-babel-io-evaluate):
* lisp/ob-octave.el (org-babel-octave-evaluate-external-process):
(org-babel-octave-evaluate-session):
* lisp/ob-perl.el (org-babel-perl-evaluate):
* lisp/ob-python.el (org-babel-python-evaluate-external-process):
(org-babel-python-evaluate-session):
* lisp/ob-ruby.el (org-babel-ruby-pp-wrapper-method):
(org-babel-ruby-evaluate):
* lisp/ob-scala.el:
* lisp/ob-tangle.el:
(org-babel-tangle-collect-blocks):
* lisp/org-agenda.el (org-agenda-get-category-icon):
(org-agenda-todo-yesterday):
* lisp/org-bbdb.el (org-bbdb-anniv-extract-date):
(org-bbdb-make-anniv-hash):
(org-bbdb-anniversaries-future):
* lisp/org-bibtex.el (org-bibtex-fleshout):
(org-bibtex-read):
(org-bibtex-write):
* lisp/org-capture.el (org-capture-set-target-location):
(org-capture-get-indirect-buffer):
(org-mks):
* lisp/org-clock.el (org-clock--oldest-date):
(org-clock-resolve):
(org-clock-sum):
(org-clock-special-range):
(org-clocktable-steps):
* lisp/org-ctags.el (org-ctags-create-tags):
* lisp/org-element.el (org-element--interpret-affiliated-keywords):
(org-element--cache-shift-positions):
(org-element--cache-sync):
(org-element--cache-submit-request):
* lisp/org-habit.el (org-habit-parse-todo):
* lisp/org-inlinetask.el (org-inlinetask-hide-tasks):
* lisp/org-lint.el (org-lint--generate-reports):
* lisp/org-mouse.el (org-mouse-get-context):
* lisp/org-plot.el (org-plot/gnuplot-to-grid-data):
(org-plot/gnuplot):
* lisp/ox-ascii.el (org-ascii--current-text-width):
(org-ascii--current-justification):
(org-ascii--build-caption):
(org-ascii--checkbox):
(org-ascii-item):
* lisp/ox-html.el (org-html-footnote-section):
* lisp/ox-latex.el (org-latex--make-option-string):
* lisp/ox-odt.el (org-odt-toc):
(org-odt-add-automatic-style):
(org-odt-format-label):
(org-odt-link--inline-image):
(org-odt--render-image/formula):
(org-odt--enumerable-image-p):
(org-odt--enumerable-latex-image-p):
(org-odt--enumerable-formula-p):
(org-odt-do-format-code):
(org-odt-table-cell): Silence byte-compiler.
 2016-07-25 17:10:53 +02:00
Nicolas Goaziou 72461eaeaf Use string-match-p' instead of org-string-match-p' 
* contrib/lisp/org-contacts.el (org-contacts-filter):
(org-contacts-complete-group):
(org-contacts-complete-tags-props):
* contrib/lisp/org-wl.el (org-wl-open):
* contrib/lisp/ox-bibtex.el (org-bibtex-merge-contiguous-citations):
* lisp/ob-core.el (org-babel-demarcate-block):
* lisp/ob-processing.el (org-babel-processing-view-sketch):
* lisp/ob-stan.el (org-babel-execute:stan):
* lisp/org-agenda.el (org-agenda-get-category-icon):
* lisp/org-clock.el (org-clock-into-drawer):
* lisp/org-element.el (org-element-link-parser):
* lisp/org-lint.el (org-lint-orphaned-affiliated-keywords):
(org-lint-invalid-babel-call-block):
(org-lint-colon-in-name):
* lisp/org-list.el (org-list-item-body-column):
* lisp/org-macro.el (org-macro-replace-all):
* lisp/org-plot.el (org-plot/gnuplot-script):
* lisp/org-table.el (org-table-export):
(org-table-align):
(org-table-get-range):
(org-table-recalculate):
(org-table-expand-lhs-ranges):
(org-table-formula-substitute-names):
(org-table-show-reference):
(orgtbl-to-texinfo):
(org-table-remote-reference-indirection):
* lisp/org.el (org-make-link-string):
(org--open-elisp-link):
(org-open-at-point):
(org-store-log-note):
(org-cached-entry-get):
(org--valid-property-p):
(org-entry-properties):
(org-buffer-property-keys):
(org-insert-drawer):
(org-display-inline-images):
(org-in-commented-heading-p):
* lisp/ox-ascii.el (org-ascii-keyword):
* lisp/ox-beamer.el (org-beamer--format-frame):
* lisp/ox-html.el (org-html-keyword):
* lisp/ox-latex.el (org-latex--label):
(org-latex-headline):
(org-latex-item):
(org-latex-keyword):
(org-latex--inline-image):
(org-latex-src-block):
* lisp/ox-odt.el (org-odt-styles-dir):
(org-odt-keyword):
(org-odt--translate-latex-fragments):
* lisp/ox-texinfo.el (org-texinfo-template):
(org-texinfo-keyword):
(org-texinfo-src-block):
* lisp/ox.el (org-export-inline-image-p):
(org-export-file-uri):
* testing/lisp/test-org-table.el (test-org-table/to-generic):
(test-org-table/to-latex):
(test-org-table/to-html):
(test-org-table/named-field):
(test-org-table/named-column):
(test-org-table/tab-indent):
(test-org-table/first-rc):
(test-org-table/last-rc): Use `string-match-p' instead of
`org-string-match-p'.
 2016-07-25 15:21:12 +02:00
Nicolas Goaziou f38f83b4f1 Remove deprecated syntax for Babel properties 
* doc/org.texi (Header arguments in Org mode properties): Remove
  reference to deprecated syntax.
* lisp/ob-core.el (org-babel-params-from-properties): Ignore deprecated
  syntax.
* testing/examples/babel.org:
* testing/examples/normal.org:
* testing/examples/ob-header-arg-defaults.org:
* testing/examples/property-inheritance.org:
* testing/lisp/test-ob-header-arg-defaults.el
(test-ob-header-arg-defaults/global/noweb):
(test-ob-header-arg-defaults/global/call):
(test-ob-header-arg-defaults/tree/overwrite/call):
(test-ob-header-arg-defaults/tree/overwrite/noweb):
(test-ob-header-arg-defaults/tree/accumulate/call):
(test-ob-header-arg-defaults/tree/accumulate/noweb):
(test-ob-header-arg-defaults/tree/complex/call):
(test-ob-header-arg-defaults/tree/complex/noweb):
* testing/lisp/test-ob.el (test-ob/elisp-in-header-arguments):
* testing/lisp/test-property-inheritance.el
(test-org-property-accumulation-overwrite-use): Update syntax.
(test-org-property-accumulation-append-use): Use new syntax.
(test-org-property-accumulation-top-val)
(test-org-property-accumulation-overwrite-val)
(test-org-property-accumulation-append-val): Remove tests.
 2016-07-04 00:41:56 +02:00
Nicolas Goaziou b2091f6d75 Move obsolete declarations into "org-compat.el" 
* lisp/org-agenda.el (org-agenda-list):
(org-agenda-goto-today):
(org-agenda-reset-view): Remove reference to obsolete
`org-agenda-ndays'.
 2016-06-30 15:20:51 +02:00
Nicolas Goaziou 999f224299 Deprecate org-called-interactively-p' in favor of called-interactively-p' 
* lisp/org-compat.el (org-called-interactively-p): Make it an obsolete
  alias for `called-interactively-p'.
* lisp/org-macs.el (org-called-interactively-p): Remove function.
* contrib/lisp/org-expiry.el (org-expiry-insinuate):
(org-expiry-deinsinuate):
(org-expiry-process-entry):
(org-expiry-process-entries):
(org-expiry-archive-subtree):
(org-expiry-add-keyword):
* lisp/ob-core.el (org-babel-expand-src-block):
(org-babel-sha1-hash):
* lisp/org-agenda.el (org-toggle-sticky-agenda):
(org-agenda-write):
(org-agenda-dim-blocked-tasks):
(org-agenda-redo):
(org-agenda-show-1):
(org-agenda-set-tags):
* lisp/org-lint.el (org-lint):
* lisp/org-table.el (org-table-blank-field):
(org-table-current-column):
(org-table-current-dline):
(org-table-sort-lines):
(org-table-sum):
(org-table-rotate-recalc-marks):
(org-table-eval-formula):
(orgtbl-send-table):
* lisp/org.el (org-mode):
(org-copy-subtree):
(org-paste-subtree):
(org-store-link):
(org-todo):
(org-occur):
(org-create-math-formula):
(org-toggle-inline-images):
(org-mark-subtree):
(org-mark-element): Apply removal.
 2016-06-23 15:08:03 +02:00
Nicolas Goaziou ff80654617 Mark `org-bound-and-true-p' as obsolete 
* lisp/org-macs.el (org-bound-and-true-p): Remove macro.
* lisp/org-compat.el (org-bound-and-true-p): Deprecated alias for
  `bound-and-true-p'.
* lisp/ob-core.el (org-babel-confirm-evaluate):
* lisp/org-agenda.el (org-agenda-write):
(org-agenda-add-entry-text):
(org-agenda-todo):
* lisp/org-clock.el (org-clocktable-defaults):
(org-clocktable-write-default):
* lisp/org-colview.el (org-columns):
(org-columns--compute-spec):
(org-agenda-columns):
* lisp/org-indent.el (org-indent-set-line-properties):
* lisp/org-inlinetask.el (org-inlinetask-fontify):
* lisp/org-mobile.el (org-mobile-write-agenda-for-mobile):
* lisp/org-pcomplete.el (pcomplete/org-mode/file-option/options):
(pcomplete/org-mode/file-option/infojs_opt):
* lisp/org-src.el (org-src-mode-configure-edit-buffer):
(org-edit-table.el):
* lisp/org.el (org-store-link):
(org-refile):
(org-get-export-keywords):
(org-set-tags):
(org-order-calendar-date-args):
(org-mode-restart):
(org-tbl-menu):
(org-beginning-of-line):
(org-end-of-line):
(org-kill-line):
(org-truely-invisible-p):
(org-remove-flyspell-overlays-in): Use `bound-and-true-p' instead of
`org-bound-and-true-p'.
 2016-06-23 14:23:52 +02:00
Nicolas Goaziou 4f63cfabb3 Deprecate org-babel-trim' in favor of org-trim' 
* lisp/org.el (org-trim): Add optional argument.

* contrib/lisp/ob-mathematica.el (org-babel-execute:mathematica):
* contrib/lisp/org-bibtex-extras.el (obe-html-export-citations):
* contrib/lisp/org-mime.el (org-mime-compose):
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-calc.el (org-babel-execute:calc):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
* lisp/ob-core.el (org-babel-initiate-session):
(org-babel-parse-multiple-vars):
(org-babel-read-element):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
(org-babel-trim): Mark obsolete.
* lisp/ob-forth.el (org-babel-forth-session-execute):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-latex.el (org-babel-expand-body:latex):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-octave-evaluate-session):
* lisp/ob-python.el (org-babel-python-evaluate-external-process):
(org-babel-python-evaluate-session):
* lisp/ob-ref.el (org-babel-ref-split-args):
* lisp/ob-ruby.el (org-babel-ruby-evaluate):
* lisp/ob-shell.el (org-babel-sh-evaluate):
* lisp/ob-table.el (org-sbe):
* lisp/ob-tangle.el (org-babel-spec-to-string):
* lisp/org-bibtex.el (org-bibtex-get):
* testing/lisp/test-ob.el (test-ob/parse-header-args): Use `org-trim'
  instead of `org-babel-trim'.
 2016-06-21 15:33:00 +02:00
Nicolas Goaziou 1c30dea0ec ob-core: Small refactoring 
* lisp/ob-core.el (org-babel-get-src-block-info): Small refactoring.
 2016-06-21 14:42:17 +02:00
Nicolas Goaziou bae2286393 ob-core: Tiny refactoring 
* lisp/ob-core.el (org-babel-graphical-output-file): Refactor code.  Fix
  error messages.
 2016-06-20 14:41:04 +02:00
Nicolas Goaziou 6cefae1637 ob-core: Use lexical binding 
* lisp/ob-core.el (org-babel-get-src-block-info):
(org-babel-insert-header-arg):
(org-babel-enter-header-arg-w-completion):
(org-babel-params-from-properties):
(org-babel-process-params):
(org-babel-read): Use lexical scoping when eval'ing.
(org-babel-examplify-region): Silence byte-compiler.
(org-babel-merge-params):
(org-babel-noweb-p): Refactor code.
 2016-06-20 14:35:16 +02:00
Nicolas Goaziou 8416402269 Silence byte-compiler 2016-06-17 00:24:12 +02:00
Nicolas Goaziou c3b42e917f ob: Remove `org-babel-lob-execute' 
* lisp/ob-lob.el (org-babel-lob-execute): Remove function
(org-babel-lob-execute-maybe):
* lisp/ob-ref.el (org-babel-ref-resolve):
* testing/lisp/test-ob-header-arg-defaults.el (test-ob-header-arg-defaults/global/call):
(test-ob-header-arg-defaults/tree/overwrite/call):
(test-ob-header-arg-defaults/tree/accumulate/call):
(test-ob-header-arg-defaults/tree/complex/call):
* testing/lisp/test-ob-lob.el (test-ob-lob/named-caching-call-line):
(test-ob-lob/caching-call-line):
(test-ob-lob/call-with-header-arguments): Apply removal.
 2016-06-16 23:37:40 +02:00
Charles Berry dd944fb590 org-babel-goto-named-src-block bugfix 
* lisp/ob-core.el (org-babel-goto-named-src-block): The user prompt
  (i.e. `initial-input' arg of `completing-read') will be the name of
  the results block, noweb reference, call reference, or symbol if
  point is in such.

* testing/lisp/test-ob.el (test-ob/goto-named-src-block): Simulate
  interactive use of `org-babel-goto-named-src-block'.
 2016-06-14 09:40:35 -07:00
Nicolas Goaziou f9ad16b22a ob-core: Do not require cl' since cl-lib' is used 
* lisp/ob-core.el (org-babel-merge-params):
(org-babel-noweb-p):
(org-babel--script-escape-inner): Use "cl-" prefix.
 2016-05-26 16:11:06 +02:00
Nicolas Goaziou 0ac099a6f8 Remove final parts of XEmacs compatibility code 
* lisp/org-compat.el: Declare `org-add-hook', `org-decompose-region',
  `org-detach-overlay', `org-file-equal-p', `org-float-time',
  `org-indent-line-to', `org-indent-to-column', `org-looking-at-p',
  `org-looking-back', `org-propertize', `org-re' and
  `org-select-frame-set-input-focus' as obsolete.
(org-overlay-display, org-overlay-before-string, org-find-overlays):
Move to "org.el"
(org-xemacs-key-equivalents, org-xemacs-p): Remove variables.
(org-region-active-p): Drop XEmacs support.
(org-xemacs-without-invisibility): Remove macro.
(org-get-x-clipboard-compat): Remove function.
* lisp/org-macs.el (org-match-string-no-properties): Remove function.

* lisp/ob-core.el:
* lisp/org-agenda.el:
* lisp/org-archive.el:
* lisp/org-clock.el:
* lisp/org-colview.el:
* lisp/org-crypt.el:
* lisp/org-element.el:
* lisp/org-faces.el:
* lisp/org-feed.el:
* lisp/org-footnote.el:
* lisp/org-habit.el:
* lisp/org-id.el:
* lisp/org-indent.el:
* lisp/org-inlinetask.el:
* lisp/org-lint.el:
* lisp/org-list.el:
* lisp/org-mouse.el:
* lisp/org-pcomplete.el:
* lisp/org-src.el:
* lisp/org-table.el:
* lisp/org-timer.el:
* lisp/org.el:
* lisp/ox-ascii.el:
* lisp/ox-odt.el:
* lisp/ox.el:
* contrib/lisp/org-notify.el:
* contrib/lisp/ox-taskjuggler.el:
* contrib/lisp/org-wikinodes.el:
* testing/lisp/test-org-src.el:
* testing/lisp/test-org.el: Silence byte-compiler.
 2016-05-26 13:56:25 +02:00
Kyle Meyer 4925d5be7b Merge branch 'maint' 2016-05-15 19:00:30 -04:00
Kyle Meyer 1c9bb0dba8 Fix up last backport 
* lisp/org.el (org-export-backend-options): Add back removed
declare-function call.
* lisp/ob-awk.el (orgtbl-to-generic):
* lisp/ob-core.el (orgtbl-to-generic):
* lisp/ob-gnuplot.el (orgtbl-to-generic): Remove BACKEND argument from
declare-function calls.

The last backport added this argument to match orgtbl-to-generic's
signature in Emacs's version of Org, but the BACKEND argument to
orgtbl-to-generic was later removed in 9209aa3 (org-table: Use "ox.el"
internally for radio tables, 2014-08-24).
 2016-05-15 18:59:19 -04:00
Paul Eggert 1f046ea4b1 Backport commit 65c8c7c from Emacs 
* lisp/ob-awk.el (orgtbl-to-generic):
* lisp/ob-core.el (orgtbl-to-generic):
* lisp/ob-exp.el (org-element-context):
* lisp/ob-gnuplot.el (org-time-string-to-time)
(orgtbl-to-generic):
* lisp/ob-haskell.el (org-export-to-file):
* lisp/ob-latex.el (org-create-formula-image)
(org-latex-compile):
* lisp/ob-python.el (run-python):
* lisp/ob-tangle.el (org-link-escape, org-back-to-heading):
* lisp/org-colview.el (org-agenda-redo):
* lisp/org-feed.el (url-retrieve-synchronously):
* lisp/org-info.el (Info-find-node):
* lisp/org-list.el (org-previous-line-empty-p):
* lisp/org-macs.el (org-string-match-p):
* lisp/org.el (org-beamer-mode):
Fix prototype to match current definition.
* lisp/ob-comint.el (tramp-flush-directory-property):
* lisp/ob-tangle.el (org-babel-update-block-body):
* lisp/org-bibtex.el (org-babel-trim):
* lisp/org-pcomplete.el (org-export-backend-options):
* lisp/org-protocol.el (org-publish-get-project-from-filename):
Fix file name in declare-function.
* lisp/ob-comint.el (with-parsed-tramp-file-name)
* lisp/ob-core.el (with-parsed-tramp-file-name):
* lisp/org.el (org-beamer-mode):
Append ‘t’ to declare-function, since the declaration isn’t a defun.
* lisp/ob-core.el (org-save-outline-visibility):
Remove; not needed.
* lisp/ob-scheme.el (run-geiser, geiser-mode)
(geiser-eval-region, geiser-repl-exit):
* lisp/ox-org.el (htmlize-buffer):
Prepend "ext:" to file name, since it is not part of Emacs.
* lisp/org-gnus.el (nnimap-group-overview-filename):
Remove decl, since function was removed.
* lisp/org-macro.el (org-with-wide-buffer):
Omit unnecessary (and mismatching) decl.
* lisp/org-clock.el (calendar-iso-to-absolute):
Declare calendar-iso-to-absolute instead, since it is the
non-obsolete version of this function.
* lisp/org-compat.el (w32-focus-frame):
Remove decl, since function is now obsolete.

Pacify ‘make check-declare’
65c8c7cb96c14f9c6accd03cc8851b5a3459049e
Paul Eggert
Sat May 14 19:57:44 2016 -0700
 2016-05-15 18:59:16 -04:00
Nicolas Goaziou 1d781b3365 Use Babel cache when exporting src blocks 
* lisp/ob-core.el (org-babel-process-params): Normalize return value.
* testing/lisp/test-ob.el (test-ob/process-params-no-duplicates): Fix
  test.
 2016-03-17 00:23:02 +01:00
Nicolas Goaziou d7d0b2725d ob-core: Remove useless code 
* lisp/ob-core.el (org-babel-where-is-src-block-result): Remove useless
  code introduced in last ob-core.el commit.
 2016-02-25 18:03:30 +01:00
Nicolas Goaziou 0f3cb188a9 ob-core: Fix Invalid search bound (wrong side of point) 
* lisp/ob-core.el (org-babel-where-is-src-block-result): Return nil when
  anonymous results would be located outside of the container of the
  source block.

* testing/lisp/test-ob.el (test-ob/where-is-src-block-result): Add test.

Reported-by: Dominik Schrempf <dominik.schrempf@gmail.com>
<http://permalink.gmane.org/gmane.emacs.orgmode/105309>
 2016-02-25 14:53:00 +01:00
Aaron Ecay 84e3f23b9a ob-core: remove cruft 
* lisp/ob-core.el (org-babel-execute-src-block): Simplify.
(org-babel-tramp-handle-call-process-region): Remove.

Commit 57104f9f changed an org-flet to a let, rendering the whole
apparatus of modifying call-process-region inoperative.  Supposedly this
was put in place to work around a bug in
tramp-handle-call-process-region, which was removed from tramp in
2012 (after being renamed to tramp-sh-call-process-region).  *shrug*
This commit just removes the whole thing.

It also no longer consults ‘org-src-lang-modes’, following on from
commit 6287416.
 2016-02-22 16:04:08 +00:00
Aaron Ecay 848a87634d Add org-babel-make-language-alias function. 
* lisp/ob-core.el (org-babel-make-language-alias): New function.
* lisp/ob-emacs-lisp.el: Use it.

Previously this was accomplished via org-src-lang-modes, but that is a
poor solution, as it conflates the remapping of language mode names with
the creation of aliases.
 2016-02-22 16:04:03 +00:00
Nicolas Goaziou 635161cd3e ob-core: Small refactoring 
* lisp/ob-core.el (org-babel-insert-result): Exit early in case of wrong
  parameters used along with inline results.
 2016-02-20 00:08:19 +01:00
Nicolas Goaziou 801a66c4b5 ob-core: Tiny refactoring 
* lisp/ob-core.el (org-babel-insert-result): Delegate removal of old
  inline results to...
(org-babel-where-is-src-block-result): ... this.

Now `org-babel-where-is-src-block-result' behaves in a symmetric way for
inline an non-inline source blocks.
 2016-02-19 23:58:01 +01:00
Nicolas Goaziou a4a6d65c4b ob-core: Fix inline results 
* lisp/ob-core.el (org-babel-where-is-src-block-result): Find results
  for inline src-blocks or inline babel call not located on a subsequent
  line, e.g., because of filling.
(org-babel-insert-result): When inline results exist, replace them
in-place.
(org-babel-remove-inline-result): Also remove results not located on the
same line as the source code.
(org-babel-examplify-region): Change signature.  Properly mark inline
results at the beginning of a line.

* testing/lisp/test-ob.el (test-ob/inline-src_blk-default-results-replace-line-1):
Add tests.
 2016-02-18 23:17:15 +01:00
Nicolas Goaziou 94b78a1198 ob-core: Silence byte-compiler 2016-02-11 00:54:12 +01:00
Nicolas Goaziou a00af53e6e ob: Refactor `org-babel-read-result' 
* lisp/ob-core.el (org-babel-read-result): Refactor code.
(org-babel-read-table):
(org-babel-read-list):
(org-babel-read-link): Fix docstring.
(org-babel-read-element): Fix indentation for example blocks.
 2016-02-11 00:00:18 +01:00
Nicolas Goaziou 49bb05487c ob: Remove variables related to inline Babel code 
* lisp/ob-lob.el (org-babel-block-lob-one-liner-regexp):
(org-babel-inline-lob-one-liner-regexp):
(org-babel-lob-one-line-regexp):
* lisp/ob-core.el (org-babel-inline-src-block-regexp): Remove variables.

(org-babel-map-inline-src-blocks):
(org-babel-map-call-lines):
(org-babel-map-executables):
(org-babel-execute-buffer):
* lisp/ob-exp.el (org-babel-exp-process-buffer):
(org-babel-exp-results): Do not use removed variables.

Babel now mostly uses the parser to handle Babel code.  Regexps are not
needed anymore.
 2016-02-10 23:50:46 +01:00
Nicolas Goaziou a1ca1f3bee ob: Remove `org-babel-inline-lob-one-line-matches' 
* lisp/ob-core.el (org-babel-inline-lob-one-liner-matches): Remove now
  unused function.
 2016-02-10 23:50:46 +01:00
Nicolas Goaziou 867263c207 ob: Remove `org-babel-get-inline-src-block-matches' 
* lisp/ob-core.el (org-babel-get-inline-src-block-matches): Remove
  function.
(org-babel-when-in-src-block):
(org-babel-insert-result): Do not use removed function.

(org-babel-remove-inline-result): Add an optional argument for a tiny
speed-up.

* testing/examples/babel.org:
* testing/lisp/test-ob.el (test-ob/inline-src_blk-default-results-replace-line-1):
  Remove needless tests.
 2016-02-10 23:50:45 +01:00
Nicolas Goaziou 9738da4732 ob: Rewrite `org-babel-get-src-block-info' using parser 
* lisp/ob-core.el (org-babel-get-src-block-info): Rewrite function.
  Change signature.
(org-babel-parse-src-block-match):
(org-babel-parse-inline-src-block-match): Remove functions.
(org-babel-execute-src-block): Remove useless function call.

* lisp/ob-exp.el (org-babel-exp-process-buffer): Make use of signature
  change.
(org-babel-exp-results): Use new return value from
`org-babel-get-src-block-info'.  Tiny refactoring.

* testing/lisp/test-ob.el (test-ob/nested-code-block): Fix test.
* contrib/lisp/org-eldoc.el (org-eldoc-get-src-lang): Use parser instead
  of removed function.

* testing/examples/babel.org: Fix test environment.
 2016-02-10 23:50:45 +01:00
Nicolas Goaziou e079c02016 Fix `org-babel-where-is-src-block-result' 
* lisp/ob-core.el (org-babel--insert-results-keyword):
(org-babel--clear-results-maybe): New functions.
(org-babel-where-is-src-block-result): Rewrite function.  Improve
accuracy, in particular when RESULTS is not the closest affiliated
keyword from the results.

* testing/lisp/test-ob.el (test-ob/where-is-src-block-result): New test.
 2016-02-10 23:50:19 +01:00
Nicolas Goaziou 3d28569130 ob-core: Distinguish between NAME and RESULTS keyword 
* lisp/ob-core.el (org-babel-name-regexp): New variable.
(org-babel-result-regexp): Only match RESULTS lines.  Lessen matching
groups.
(org-babel-result-w-name-regexp): Fix regexp.  Add a docstring.
(org-babel-named-data-regexp-for-name): Use new variable.
(org-babel-current-result-hash):
(org-babel-set-current-result-hash):
(org-babel-hide-hash):
(org-babel-result-names):
(org-babel-where-is-src-block-result): Apply changes above.
 2016-02-10 15:40:11 +01:00
Nicolas Goaziou 7fcc1c710b ob-core: Prevent false positive in `org-find-named-result' 
* lisp/ob-core.el (org-babel-find-named-result): Prevent false positive
  using parser.
(org-babel-current-result-hash):
(org-babel-set-current-result-hash):
(org-babel-where-is-src-block-result): Do not rely on some undocumented
match data.

* testing/lisp/test-ob.el (test-ob/find-name-result): New test.
 2016-02-10 15:40:11 +01:00
Nicolas Goaziou 8865920879 ob: Remove indentation information from Babel properties 
* lisp/ob-core.el (org-babel-get-src-block-info): Do not return block
  indentation.
(org-babel-parse-src-block-match): Ignore block indentation.
(org-babel-demarcate-block): Find appropriate indentation instead of
using the one from the original block.
(org-babel-where-is-src-block-result): Change signature.  Indent
according to context instead of relying on indentation from original
block.
(org-babel-insert-result): Change signature.
(org-babel-check-confirm-evaluate):
(org-babel-execute-src-block):
(org-babel-insert-header-arg): Apply change to src-block info.

* lisp/ob-exp.el (org-babel-exp-process-buffer): Apply change to
  src-block info.

* lisp/ob-lob.el (org-babel-lob-get-info): Do not return indentation.
(org-babel-lob-execute): Apply change to lob-info.

Indentation from source block is often wrong at the block and its
results may not be in the same context.
 2016-02-10 15:40:10 +01:00
Nicolas Goaziou 5f94f49db0 ob: Optimize `org-babel-lob-get-info' 
* lisp/ob-core.el (org-babel-goto-named-src-block): Use parser instead
  of `org-babel-lob-one-liner-regexp'.
* lisp/ob-lob.el (org-babel-lob-execute-maybe): Ignore spurious check,
  now handled by the parser.
(org-babel-lob-get-info): Fully use parser.  Accept a new optional
argument to avoid parsing the same location twice.

* lisp/ob-exp.el (org-babel-exp-process-buffer):
* lisp/ob-ref.el (org-babel-ref-resolve): Optimize call to
  `org-babel-lob-get-info'.
 2016-02-10 15:40:10 +01:00
Nicolas Goaziou 24dacbd833 Merge branch 'maint' 2016-02-07 00:04:27 +01:00
Aaron Ecay 825ce04b9e ob-core: fix bug when source block is at bob 
* lisp/ob-core.el (org-babel-get-src-block-info): Fix bug.
 2016-02-06 22:01:22 +00:00
Nicolas Goaziou a904245d05 Merge branch 'maint' 2016-01-31 20:58:47 +01:00
Nicolas Goaziou 2f727b0f48 ob-core: Silence byte-compiler 2016-01-31 20:57:47 +01:00