Commit Graph

26823 Commits

Author SHA1 Message Date
Ihor Radchenko dbf415b840
Revert "org-texinfo--match-definition: Drop redundant `save-match-data'"
This reverts commit e32bd5f7c7.

This is `pcase-let*', not `pcase', so the arguments are _all_
evaluated and match data must be preserved in the ARGS binding.

Link: https://yhetil.org/emacs-devel/877cp8bkpa.fsf@bernoul.li
2023-09-02 20:07:07 +03:00
Ihor Radchenko 21654e9a44
* lisp/ob-core.el (org-babel-examplify-region): Document all the arguments 2023-09-02 12:53:08 +03:00
Ihor Radchenko af9c063edf
* lisp/ob-core.el (org-babel-remove-result): Document function arguments 2023-09-01 14:03:39 +03:00
Ihor Radchenko f97877a069
ox-latex: Prefer :latex-src-block-backend INFO property over variable
* lisp/ox-beamer.el (org-beamer-template):
* lisp/ox-latex.el (org-latex-template): Reuse INFO plist to retrieve
src backend.  Direct usage can break user settings where INFO channel
is expected to be modified and have effect.
2023-09-01 13:42:27 +03:00
Ihor Radchenko 91a532b40e
org-babel-expand-noweb-references: Document all the function arguments
* lisp/ob-core.el (org-babel-expand-noweb-references): Fix the
docstring, documenting every argument.
2023-08-31 14:27:36 +03:00
Ihor Radchenko deb5ea0fc0
ob-ruby: Work around long line input
* lisp/ob-ruby.el (org-babel-ruby-var-to-ruby): Some comint buffers
are not able to process more than 4096 characters in one line - the
rest of the line can be silently ignored.  Work around this by
splitting list vars to multiple lines.

Link: https://orgmode.org/list/87pm3ut3zi.fsf@localhost
2023-08-31 12:47:01 +03:00
Ihor Radchenko db679cff98
* lisp/ob-ruby.el (org-babel-ruby-initiate-session): Fix multiline
Without a newline at the end, repl sometimes does not interpret the
prompt settings correctly.
2023-08-31 12:46:21 +03:00
Ihor Radchenko 83411c0d3e
* lisp/ob-ruby.el (org-babel-ruby-evaluate): Fix eoe indicator 2023-08-31 12:46:09 +03:00
Ihor Radchenko ff53846f31
org-babel-comint-with-output: Fix another edge case with REPL prompts
* lisp/ob-comint.el (org-babel-comint-with-output): Sometimes, REPL
can split whitespace between sequence of prompt prompt prompt.

In particular, inf-ruby did this on multiline input.
2023-08-31 12:42:21 +03:00
Jack Kamm 8000b11209 test-ob-python: Unit test for restarting session
See: https://list.orgmode.org/87ttsnh5bx.fsf@localhost/T/#t

* testing/lisp/test-ob-python.el (test-ob-python/session-restart): New
test for restarting ob-python session process.
2023-08-30 21:48:36 -07:00
Jack Kamm b49275acbe Merge branch 'bugfix' 2023-08-30 21:48:18 -07:00
Jack Kamm c81dba2fb9 ob-python: Fix hanging on second start
See: https://list.orgmode.org/87ttsnh5bx.fsf@localhost/T/#t

* lisp/ob-python.el (org-babel-python-initiate-session-by-key): Switch
from `org-babel-comint-wait-for-output' to `sleep-for' while waiting
for `org-babel-python--initialized', to prevent hanging on restarted
Python process.
2023-08-30 21:38:09 -07:00
Ihor Radchenko d8af9c40e0
org-babel-remove-result-one-or-many: Document the prefix argument
* lisp/ob-core.el (org-babel-remove-result-one-or-many): Rename prefix
argument to the conventional ARG and document it in the docstring.
2023-08-30 08:24:11 +03:00
Ihor Radchenko cd0e225e34
* lisp/ob-core.el (org-babel-import-elisp-from-file): Document all function arguments 2023-08-29 12:47:12 +03:00
Ihor Radchenko 3f6c33b7b6
* lisp/ob-core.el (org-babel-temp-stable-file): Document all function arguments 2023-08-29 12:46:58 +03:00
Ihor Radchenko e32bd5f7c7
org-texinfo--match-definition: Drop redundant `save-match-data'
* lisp/ox-texinfo.el (org-texinfo--match-definition): It is safe to
drop `save-match-data' as the function modifies the match data anyway,
and `save-match-data' does not affect anything else.
2023-08-29 12:38:04 +03:00
Ihor Radchenko f02b4c8b4d
org-refile-get-targets: Improve malformed target handling
* lisp/org-refile.el (org-refile-get-targets): Throw better errors
when `org-refile-targets' value is malformed.  Allow common mistake
with not using a cons cell in the target description.
2023-08-27 15:18:12 +03:00
Ihor Radchenko 320c29c021
* lisp/ob-core.el (org-babel-remove-inline-result): Document DATUM argument 2023-08-27 14:04:25 +03:00
Ihor Radchenko 9f12a1b9e4
org-babel-map-executables: Avoid using `save-match-data'
* lisp/ob-core.el (org-babel-map-executables): Drop
`save-match-data' as it may be costly.
2023-08-27 13:10:44 +03:00
Ihor Radchenko 05064052ad
org-babel-map-call-lines: Avoid using `save-match-data'
* lisp/ob-core.el (org-babel-map-call-lines): Drop
`save-match-data' as it may be costly.
2023-08-27 13:10:26 +03:00
Ihor Radchenko 99b65bb212
org-babel-map-inline-src-blocks: Avoid using `save-match-data'
* lisp/ob-core.el (org-babel-map-inline-src-blocks): Drop
`save-match-data' as it may be costly.
2023-08-27 13:09:51 +03:00
Ihor Radchenko b22ebf8c78
Merge branch 'bugfix' 2023-08-27 11:21:25 +03:00
Ihor Radchenko 21171d1366
* testing/lisp/test-org.el (test-org/insert-heading): Fix test
The test itself is wrong - `org-insert-heading' was correctly obeying
blank before the entry at point when inserting a new heading.
2023-08-27 11:18:49 +03:00
Ihor Radchenko 1dcde9889b
Merge branch 'bugfix' 2023-08-26 19:13:33 +03:00
Ihor Radchenko 7c929e9d8c
* lisp/oc-basic.el: Fix parsing "editor" field in json bibliographies
(org-cite-basic--parse-json): Parse "editor" field, not "editors".
"editors" is a typo - the common field name is "editor".  For example,
see https://www.bibtex.com/e/book-entry/.

Reported-by: Margaret Patterson <emacs-m@ninecats.org>
Link: https://list.orgmode.org/orgmode/ea0d8557-f67d-c8b1-522f-b5ad37612d99@ninecats.org/
2023-08-26 19:10:05 +03:00
Ihor Radchenko b3c7ebecac
* lisp/ob-core.el (org-babel-format-result): Document SEP argument 2023-08-26 15:06:20 +03:00
Ihor Radchenko f299fbbbb0
org-export--prepare-file-contents: Drop redundant `save-match-data'
`save-match-data' is costly.  We should not use it unless necessary.
2023-08-26 14:29:17 +03:00
Ihor Radchenko 99c40177ad
org-babel-demarcate-block: Document prefix argument in the docstring 2023-08-25 14:26:44 +03:00
Ihor Radchenko 5ff5ac03b6
* lisp/ox.el (org-export-parse-include-value): Remove `save-match-data'
Avoid using GC-expensive `save-match-data'.
2023-08-25 14:13:23 +03:00
Ihor Radchenko 0ceb562b33
org-fold-core--specs: Remove wrong ":alias" alias
* lisp/org-fold-core.el (org-fold-core-get-folding-spec-from-alias):
Do not put ":alias" as an actual alias.  The code did not account that
`assq' returns the whole cons cell, not just value of the alist item.
2023-08-25 11:33:29 +03:00
Nicholas Vollmer 538ddecb30
* lisp/ob-lilypond.el: Satisfy checkdoc
(org-babel-lilypond-compile-post-tangle):
(org-babel-lilypond-display-pdf-post-tangle):
(org-babel-lilypond-play-midi-post-tangle):
(org-babel-execute:lilypond):
(org-babel-lilypond-tangle):
(org-babel-lilypond-process-basic):
(org-babel-lilypond-parse-line-num):
(org-babel-lilypond-set-header-args):
Fix docstring
2023-08-25 10:56:50 +03:00
Ihor Radchenko fcca762741
* testing/lisp/test-ob-clojure.el: Remove incorrect tests (all the tests)
("cider"): Remove assertions for cider.  Clojure supports more than cider.
(ob-clojure/simple-session):
(ob-clojure/initiate-session):
(ob-clojure/initiate-session-with-var): Remove session tests -
ob-clojure has no session support.
(ob-clojure/tangle-without-ns): Remove tangle test - it has no
relation to ob-clojure.

Add FIXME to implement some tests, as we end up with 0 ob-clojure
tests after this commit.

Link: https://orgmode.org/list/87v8d4ivqh.fsf@localhost
2023-08-25 10:46:36 +03:00
Ihor Radchenko 7bdec435ff
org-export-expand-include-keyword: Drop unnecessary call to `save-match-data'
* lisp/ox.el (org-export-expand-include-keyword): Do not wrap
`org-element-at-point' into `save-match-data'.  The search data from
`re-search-forward' is unused in the code and `save-match-data' call
is costly.
2023-08-24 15:10:32 +03:00
Ihor Radchenko d5ee33fed8
lisp/ob-core: List all the arguments in some docstrings
* lisp/ob-core.el (org-babel-parse-multiple-vars):
(org-babel-goto-named-src-block):
(org-babel-goto-named-result): Describe all the function arguments in
the docstring.
2023-08-24 13:27:58 +03:00
Ihor Radchenko 85c94ecfc2
ox-latex: Improve warning for unexpected org-latex-src-block-backend
* lisp/ox-latex.el (org-latex-inline-src-block):
(org-latex-src-block): Update the warning text, explicitly mentioning
the variable name to be adjusted.

Reported-by: Guillaume MULLER <guillaume.muller@emse.fr>
Link: https://orgmode.org/list/b5c056cb-3258-4a11-2d9b-33c97b112d62@emse.fr
2023-08-24 10:37:52 +03:00
Ihor Radchenko 3c3db7b337
oc-basic: Fix detecting changes in symlinked bibliography
* lisp/oc-basic.el (org-cite-basic--parse-bibliography): Use
`file-truename' to follow symlinks first before checking bibliography
file change times.

Reported-by: Leo Butler <Leo.Butler@umanitoba.ca>
Link: https://orgmode.org/list/877cpmkds1.fsf@t14.reltub.ca
2023-08-24 10:21:21 +03:00
Ihor Radchenko 1665283f25
Merge branch 'bugfix' 2023-08-24 10:18:02 +03:00
Liu Hui 973e50c839
* lisp/org.el (org-at-timestamp-p): Fix match groups in docstring
The docstring was not accurate from the times when group information
was added to it.  The patch uses the groups, as they appear in the
function code itself.
2023-08-24 10:16:22 +03:00
Ihor Radchenko 5e7427c6d1
* lisp/ob-core.el (org-babel-hide-result-toggle): Document FORCE argument 2023-08-23 14:24:53 +03:00
Ihor Radchenko 430c72924c
ob-ruby: Fix ruby tests
* lisp/ob-ruby.el (org-babel-ruby-prompt):
(org-babel-ruby-define-prompt): New variables used to set appropriate
unique prompt and disable echo in session.
(org-babel-ruby-initiate-session): Setup prompt and echo during
session initialization.
(org-babel-ruby-evaluate): Rely on `org-babel-ruby-initiate-session'
to setup prompt and echo.  Re-setting the prompt back after every
evaluation can be tricky because of async nature of the prompt, so it
is now dropped.
2023-08-23 14:19:52 +03:00
Allen Li c905565fa8
org-element: Raise gc-cons-threshold for org-element-cache-map
This garbage collects many times when calling
`org-get-buffer-tags' (such as during tag completion) in a large file
with many tags.  Raise `gc-cons-threshold' as this may affect other
callers in large files.

Note that `org-element-parse-buffer' also raises `gc-cons-threshold'
as a precedent.

This has no effect on most callers and increases performance for
extreme cases.

* lisp/org-element.el (org-element-cache-map): Raise
`gc-cons-threshold'.
2023-08-23 12:54:43 +03:00
Jack Kamm 579e8c5723 ob-python: Results handling for dicts, dataframes, arrays, plots
Thanks to Ihor Radchenko and Liu Hui for valuable feedback on this
patch.

* lisp/ob-python.el (org-babel-execute:python): Parse graphics-file
from params, and pass it to `org-babel-python-evaluate'.
(org-babel-python--output-graphics-wrapper): New constant.  Python
code to save graphical output.
(org-babel-python--def-format-value): New constant.  Python function
to format and save value results to file.  Includes handling for
graphics, dataframes, and arrays.
(org-babel-python-table-or-string): Prevent `org-babel-script-escape'
from mangling dict results.
(org-babel-python--setup-session): New function to
run setup code within Python session.
(org-babel-python-initiate-session-by-key): Replace lambda with
`org-babel-python--setup-session' in `python-shell-first-prompt-hook',
or run it directly if the session was started outside Org.
(org-babel-python-wrapper-method): Removed.  Instead use part of the
string directly in `org-babel-python-evaluate-external-process'.
(org-babel-python-pp-wrapper-method): Removed.  Pretty printing is now
handled by `org-babel-python--def-format-value'.
(org-babel-python--exec-tmpfile): Removed.  Instead use the raw string
directly in `org-babel-python-evaluate-session'.
(org-babel-python-format-session-value): Updated to use
`org-babel-python--def-format-value' for formatting value result.
(org-babel-python-evaluate): New parameter graphics-file.  Pass
graphics-file onto downstream helper functions.
(org-babel-python-evaluate-external-process): New parameter
graphics-file.  Use `org-babel-python--output-graphics-wrapper' for
graphical output.  For value result, use
`org-babel-python--def-format-value'.  Don't call `org-trim' on
results, to prevent misalignment of pandas DataFrames.
(org-babel-python-evaluate-session): New parameter graphics-file.  Use
`org-babel-python--output-graphics-wrapper' for graphical output.
Replace the removed constant `org-babel-python--exec-tmpfile' with the
string directly.  Rename local variable tmp-results-file to
results-file, which may take the value of graphics-file when provided.
(org-babel-python-async-evaluate-session): New parameter
graphics-file.  Use `org-babel-python--output-graphics-wrapper' for
graphical output.  Rename local variable tmp-results-file to
results-file, which may take the value of graphics-file when provided.
2023-08-22 16:22:17 -07:00
Ihor Radchenko 53c9d91d3c
org-element: Fix post-blank shared between items
* lisp/org-element.el (org-element-item-parser): Do not parse beyond
LIMIT - they may extend :post-blank beyond parent list contents.
(org-element-plain-list-parser): Make sure that plain list always owns
the trailing blank lines.
(org-element-cache-version): Bump cache version.
* testing/lisp/test-org-element.el (test-org-element/item-parser): Add
test.

Reported-by: Tom Alexander <tom@fizz.buzz>
Link: https://orgmode.org/list/1c833eb8-c556-437b-ac5b-be360ebcc869@app.fastmail.com
2023-08-22 11:25:59 +03:00
Ihor Radchenko 80ae8462a6
org-element--standard-properties: Re-order, putting boundaries in order
* lisp/org-element-ast.el (org-element--standard-properties): Re-order
the properties, making the element boundaries in order as they will
appear in buffer.  Re-group other properties.
2023-08-22 11:23:16 +03:00
Ihor Radchenko 19a1a5024b
Update version number for the 9.6.8 release 2023-08-22 10:35:22 +03:00
Ihor Radchenko 7219b006bd
org-element: Fix loading obsolete persistent caches
* lisp/org-element.el (org-element-cache-version): New constant
defining the current cache version.
(org-element-cache-reset): Use the new variable.
* lisp/org.el (org-mode): Assert loading the correct cache version.

Reported-by: Gregor Zattler <telegraph@gmx.net>
Link: https://orgmode.org/list/87350cvm3d.fsf@no.lan
2023-08-21 13:24:41 +03:00
Ihor Radchenko 168b99ba94
org-babel-join-splits-near-ch: Fix the docstring
* lisp/ob-core.el (org-babel-join-splits-near-ch): Explain all the
arguments and what the function does.
2023-08-21 13:01:54 +03:00
Ihor Radchenko 680138d7ff
fixup! test-org-colview/...: Fix Emacs 28 compatibility 2023-08-21 12:58:44 +03:00
Ihor Radchenko 8b35734b49
test-org-colview/...: Fix Emacs 28 compatibility
*
testing/lisp/test-org-colview.el (test-org-colview/columns--move-row-stay-at-the-same-column):
Skip the test in Emacs <29 where it is not possible to determine
visual column.
2023-08-21 10:21:33 +03:00
Ihor Radchenko 299193bf09
org-display-remote-inline-images: Add new allowed value t
* lisp/org.el (org-display-remote-inline-images): Allow value t as
alias to cache.
(org--create-inline-image): Handle t value.
2023-08-20 14:15:49 +03:00