Commit Graph

62 Commits

Author SHA1 Message Date
Bruno BARBIER 8151d52574
ob-shell: Use `process-file' when stdin or cmdline
lisp/ob-shell.el (org-babel-sh-evaluate): Use `process-file' (instead
of `call-process-shell-command') so that `org-babel-sh-evaluate' will
invoke file name handlers based on `default-directory', if needed,
like when using a remote directory.

lisp/org-compat.el (with-connection-local-variables): New
compatibility macro.

testing/lisp/test-ob-shell.el (ob-shell/remote-with-stdin-or-cmdline):
New test.

testing/org-test.el (org-test-with-tramp-remote-dir): New macro.

Fixes https://list.orgmode.org/CKMOBWBK709F.1RUN69SRWB64U@laptop/.
2022-09-05 18:31:39 +08:00
Ihor Radchenko e81a094383
Assert all the Org files to load the same Org version
* lisp/org-compat.el (org-assert-version): New macro comparing Org
version at compile time and laod time.

Add `org-assert-version' call to all files:

* lisp/org-macs.el:
* lisp/org-crypt.el:
* lisp/org-ctags.el:
* lisp/org-cycle.el:
* lisp/org-datetree.el:
* lisp/org-duration.el:
* lisp/org-element.el (avl-tree):
* lisp/org-entities.el:
* lisp/org-faces.el:
* lisp/org-feed.el:
* lisp/org-fold-core.el:
* lisp/org-fold.el:
* lisp/org-footnote.el:
* lisp/org-goto.el:
* lisp/org-habit.el:
* lisp/org-id.el:
* lisp/org-indent.el:
* lisp/org-inlinetask.el:
* lisp/org-keys.el:
* lisp/org-lint.el:
* lisp/org-list.el:
* lisp/org-macro.el:
* lisp/org-mobile.el:
* lisp/org-mouse.el:
* lisp/org-num.el:
* lisp/org-pcomplete.el:
* lisp/org-persist.el:
* lisp/org-plot.el:
* lisp/org-protocol.el:
* lisp/org-refile.el:
* lisp/org-src.el:
* lisp/org-table.el:
* lisp/org-tempo.el:
* lisp/org-timer.el:
* lisp/org.el:
* lisp/ox-ascii.el:
* lisp/ox-beamer.el:
* lisp/ox-html.el:
* lisp/ox-icalendar.el:
* lisp/ox-koma-letter.el:
* lisp/ox-latex.el:
* lisp/ox-man.el:
* lisp/ox-md.el:
* lisp/ox-odt.el:
* lisp/ox-org.el:
* lisp/ox-publish.el:
* lisp/ox-texinfo.el:
* lisp/ox.el:
2022-09-04 12:24:55 +08:00
Ihor Radchenko e36c3cc21b
org-babel-sh-evaluate: Do not issue string :results value
* lisp/ob-shell.el (org-babel-sh-evaluate): Do not assume that
:results value always yields string value.  Avoid error when results
is nil.
2022-09-01 23:08:55 +08:00
Ihor Radchenko a35d163685
ob-shell: Fix output containing strings matching `comint-prompt-regexp'
* lisp/ob-comint.el (org-babel-comint-wait-for-output): Do not rely on
`face-at-point' returning non-nil.
* lisp/ob-shell.el (org-babel-shell-set-prompt-commands): New constant
holding shell-specific commands to change prompt.
(org-babel-prompt-command): New variable holding command to be user to
set distinguishable prompt.
(org-babel-shell-initialize): Set `org-babel-prompt-command' according
to shell name.
(org-babel-sh-prompt): New variable holding default shell prompt.
(org-babel-sh-initiate-session): Change the default prompt to
`org-babel-sh-prompt' and alter `comint-prompt-regexp' to match it
tightly.

Fixes https://list.orgmode.org/CKK9TULBP2BG.2UITT31YJV03J@laptop/T/#mc8e3ca2f5f1b9a94040a68b4c6201234b209041c
2022-08-26 20:47:13 +08:00
Stefan Kangas 13d97ee18c
Prefer "website" to "homepage"
Emacs now advises using "website" (instead of "homepage") and
consequently to use the "URL" comment header instead of "Homepage".

* README:
* README_ELPA:
* doc/org-guide.org (Creating Footnotes):
* doc/org-manual.org (Creating Footnotes):
* etc/styles/README (URL): Prefer "website" to "homepage".

* lisp/*.el:
* mk/org-fixup.el: Replace the "Homepage" header comment with "URL".
2022-06-26 10:10:48 +08:00
Ignacio Casso f9ea6c61ed
Use `set-default-toplevel-value' in `defcustom' setters
* lisp/ob-lilypond.el (org-babel-lilypond-commands):
* lisp/ob-shell.el (org-babel-shell-names):
* lisp/org-capture.el (org-capture-templates):
* lisp/org-clock.el (org-clock-ask-before-exiting):
* lisp/org-duration.el (org-duration-units):
* lisp/org-faces.el (org-set-tag-faces):
* lisp/org-footnote.el (org-footnote-section):
* lisp/org-list.el (org-plain-list-ordered-item-terminator):
(org-list-allow-alphabetical):
* lisp/org.el (org-babel-do-load-languages):
(org-set-modules):
(org-export-backends):
(org-use-fast-todo-selection):
(org-enforce-todo-dependencies):
(org-enforce-todo-checkbox-dependencies):
(org-display-custom-times):
(org-set-packages-alist):
(org-set-emph-re):
* lisp/ox-odt.el (org-odt-schema-dir): Use
`set-default-toplevel-value' instead of `set' or `set-default' in
`defcustom' :set argument.

This commit fixes a bug that occurred when using an autoload function
inside a let-binding for a custom variable when the feature defining
both the function and the custom variable had not been loaded yet.

See bug#54399 and
https://lists.gnu.org/archive/html/emacs-orgmode/2022-03/msg00085.html,
https://lists.gnu.org/archive/html/emacs-orgmode/2022-06/msg00226.html
2022-06-14 21:54:45 +08:00
Kyle Meyer 5a229cbc44 Update copyright year to 2022 2022-01-01 15:17:08 -05:00
Kyle Meyer 99eafe3787 Update copyright year to 2021 2021-01-01 14:59:01 -05:00
Bastien 07c6b11258 ob-shell.el: New option `org-babel-shell-results-defaults-to-output'
* lisp/ob-shell.el (org-babel-shell-results-defaults-to-output):
New option.

* testing/lisp/test-ob-exp.el (ob-exp/exports-inline): Fix test.

See <https://orgmode.org/list/CA+A2iZaziAfMeGpBqL6qGrzrWEVvLvC0DUw++T4gCF3NGuW-DQ@mail.gmail.com>
2020-09-07 19:30:04 +02:00
Bastien 612f4db090 ob-shell.el: Fix previous commit
* lisp/ob-shell.el (org-babel-execute:shell)
(org-babel-sh-evaluate): Use the value only when value is set or
when no :result is set.
2020-09-06 22:35:28 +02:00
Bastien 2f53429413 ob-shell.el: Use the exit status as the default result
* lisp/ob-shell.el (org-babel-execute:shell)
(org-babel-sh-evaluate): Use the exit code as the value and,
consequently, as the result when no :results header is set.

See this thread:
https://orgmode.org/list/CA+A2iZaziAfMeGpBqL6qGrzrWEVvLvC0DUw++T4gCF3NGuW-DQ@mail.gmail.com/

And Tim's useful summary here:
https://orgmode.org/list/87sgiszqc1.fsf@gmail.com/

This commit resolves the issue by deciding not to make an exception
for ob-shell.el:

- the "value" of executing a shell/bash script is the exit code
- when no :results header is set, use the value as the result
- use :results output to use the stdout
2020-09-06 19:12:22 +02:00
Bastien 08428fed78 ob-shell.el: Delete `org-babel-shell-return-value-is-exit-status'
* lisp/ob-shell.el (org-babel-sh-evaluate): Return the output
by default.  Return exit status as the "value" when :result is
explicitely set to "value".

* lisp/ob-shell.el
(org-babel-shell-return-value-is-exit-status): Delete option.

* doc/org-manual.org (Collection): Be more accurate.

See the whole thread here:
https://lists.gnu.org/archive/html/emacs-orgmode/2020-02/msg00715.html

Thanks to everyone in this discussion.
2020-02-22 10:58:55 +01:00
Bastien 0c02928eb2 ob-shell.el: Rename `ob-shell-return-value-is-exit-status'
* lisp/ob-shell.el
(org-babel-shell-return-value-is-exit-status): Rename from
`ob-shell-return-value-is-exit-status'.
(org-babel-execute:shell, org-babel-sh-evaluate): Use new name.
(org-babel--variable-assignments:bash_assoc): Fix indentation.
2020-02-21 08:26:37 +01:00
Bastien 4533d783c2 ob-shell.el: New option `ob-shell-return-value-is-exit-status'
* lisp/ob-shell.el (ob-shell-return-value-is-exit-status): New
option.
(org-babel-execute:shell, org-babel-sh-evaluate): Use it.

In a shell source code block, when there is no :results header or when
the :results header is "value", the code block should return the value
of the source block, called in "functional mode", i.e. with the code
being called as a function and returning a value.  See this part of
the manual:

‘value’
     Default.  Functional mode.  Org gets the value by wrapping the code
     in a function definition in the language of the source block.  That
     is why when using ‘:results value’, code should execute like a
     function and return a value.  For languages like Python, an
     explicit ‘return’ statement is mandatory when using ‘:results
     value’.  Result is the value returned by the last statement in the
     code block.

Strictly speaking, the "return value" of a shell source code block
should be the exit status of the last command in the block.  As the
manpage for bash says: "the return value of a simple command is its
status".

This patch allows this strict interpretation of "value" for shell
blocks, while sticking to the current behavior of returning the shell
output of the code block.

Thanks to Vladimir Nikishkin for asking a question about this and to
Eric Fraga and Tim Cross for their inputs on this issue.
2020-02-19 16:57:15 +01:00
Bastien 6a1f6ee1f8 Tiny formatting fixes
* lisp/ox.el (org-export-table-dimensions):
* lisp/ox-texinfo.el (org-texinfo-template):
* lisp/ox-md.el (org-md-link):
* lisp/ox-icalendar.el (org-icalendar-use-UTC-date-time-p):
* lisp/ox-ascii.el (org-ascii-fixed-width):
* lisp/org.el (org-context):
* lisp/org-table.el (org-table-eval-formula)
(org-table-export):
* lisp/org-refile.el:
* lisp/org-plot.el (org-plot/gnuplot-to-grid-data):
* lisp/org-num.el (org-num):
* lisp/org-mouse.el (org-mouse-popup-global-menu)
(org-mouse-context-menu):
* lisp/org-macro.el (org-macro):
* lisp/org-lint.el (org-lint):
* lisp/org-keys.el (org-keys):
* lisp/org-duration.el:
* lisp/org-clock.el (org-clock-get-last-clock-out-time)
(org-clock-update-mode-line, org-find-open-clocks):
* lisp/org-agenda.el (org-diary)
(org-agenda-check-for-timestamp-as-reason-to-ignore-todo-item)
(org-agenda-highlight-todo, org-cmp-alpha)
(org-agenda-filter-by-category):
* lisp/ol.el (org-link-expand-abbrev, ol):
* lisp/ol-docview.el (ol-docview):
* lisp/ol-bibtex.el (org-execute-file-search-in-bibtex)
(org-bibtex, org-bibtex-read):
* lisp/ol-bbdb.el (org-bbdb-anniversary-description):
* lisp/ob-tangle.el (org-babel-tangle-jump-to-org):
* lisp/ob-table.el (org-babel-table-truncate-at-newline):
* lisp/ob-stan.el:
* lisp/ob-sqlite.el (org-babel-sqlite-table-or-scalar):
* lisp/ob-sql.el:
* lisp/ob-shen.el:
* lisp/ob-shell.el (org-babel-prep-session:shell)
(org-babel-prep-session:shell):
* lisp/ob-sed.el (org-babel-execute:sed)
(org-babel-execute:sed):
* lisp/ob-screen.el:
* lisp/ob-sass.el:
* lisp/ob-ruby.el (org-babel-prep-session:ruby)
(org-babel-prep-session:ruby):
* lisp/ob-ref.el (org-babel-ref-resolve, ob-ref):
* lisp/ob-python.el (org-babel-prep-session:python)
(org-babel-prep-session:python):
* lisp/ob-plantuml.el:
* lisp/ob-picolisp.el:
* lisp/ob-perl.el:
* lisp/ob-org.el:
* lisp/ob-octave.el (org-babel-prep-session:octave)
(org-babel-prep-session:octave)
(org-babel-octave-evaluate-session):
* lisp/ob-ocaml.el:
* lisp/ob-mscgen.el (org-babel-execute:mscgen)
(org-babel-execute:mscgen):
* lisp/ob-maxima.el:
(ob-maxima):
* lisp/ob-matlab.el:
* lisp/ob-makefile.el:
* lisp/ob-lua.el (org-babel-prep-session:lua)
(org-babel-prep-session:lua):
* lisp/ob-lisp.el:
* lisp/ob-ledger.el:
* lisp/ob-latex.el (org-babel-expand-body:latex)
(org-babel-expand-body:latex, ob-latex):
* lisp/ob-js.el:
* lisp/ob-java.el:
* lisp/ob-io.el (org-babel-prep-session:io)
(org-babel-prep-session:io):
* lisp/ob-hledger.el:
* lisp/ob-haskell.el:
* lisp/ob-groovy.el (org-babel-groovy-wrapper-method)
(org-babel-groovy-evaluate):
* lisp/ob-gnuplot.el:
* lisp/ob-fortran.el (org-babel-expand-body:fortran)
(org-babel-expand-body:fortran):
* lisp/ob-forth.el (org-babel-forth-session-execute):
* lisp/ob-exp.el (ob-exp):
* lisp/ob-eval.el:
* lisp/ob-emacs-lisp.el:
* lisp/ob-ebnf.el:
* lisp/ob-dot.el:
* lisp/ob-ditaa.el:
* lisp/ob-css.el:
* lisp/ob-core.el (org-babel-put-rownames):
* lisp/ob-coq.el:
* lisp/ob-comint.el:
* lisp/ob-calc.el:
* lisp/ob-awk.el:
* lisp/ob-asymptote.el:
* lisp/ob-abc.el:
* lisp/ob-R.el (org-babel-prep-session:R): Formatting fixes.
2020-02-18 22:57:37 +01:00
Kyle Meyer ff5fc050d3 Update copyright year to 2020 2020-01-01 13:38:46 -05:00
Juanma Barranquero 9c611fd8ac Backport commit 41ba8231e from Emacs
* lisp/ob-scheme.el (org-babel-scheme-get-buffer-impl):
* lisp/ob-shell.el (org-babel--variable-assignments:sh-generic)
(org-babel--variable-assignments:bash_array)
(org-babel--variable-assignments:bash_assoc)
(org-babel--variable-assignments:bash):
* lisp/org-clock.el (org-day-of-week):
(table--put-cell-valign-property): Fix typos.
* lisp/ob-core.el (org-babel-named-src-block-regexp-for-name)
(org-babel-named-data-regexp-for-name): Doc fix.
(org-babel-src-block-names, org-babel-result-names): Fix typos.

lisp/*.el: Fix typos and improve some docstrings
41ba8231ef072571e1a6feabc15d113e5cf57556
Juanma Barranquero
Sun Oct 20 12:12:27 2019 +0200
2019-10-27 15:54:59 -04:00
Bastien f584d37a67 Update copyright year 2019-01-01 11:50:56 +01:00
stardiviner dcf1796636 ob-shell: Initialize header arguments for other shell names
* lisp/ob-shell.el (org-babel-shell-initialize) Initialize
  org-babel-default-header-args: for shell names.
2018-06-15 22:46:11 +02:00
Aaron Ecay 4afb7f747b Update declare-function calls for functions that have moved.
In cases where functions have moved from org.el into org-macs.el, it
is often possible to replace declare-function by (require 'org-macs)
2018-05-10 01:04:12 +01:00
Nicolas Goaziou bb03551246 ob-shell: Small refactoring
* lisp/ob-shell.el (org-babel-sh-evaluate): Slightly refactor code.
2018-04-15 12:26:03 +02:00
stardiviner f57df8fc74 ob-shell: Add zsh and fish shells.
* ob-shell.el (org-babel-shell-names) add "zsh" and "fish".
2018-04-02 20:42:16 +02:00
Tim Landscheidt b289a65be7 Use https for links to orgmode.org
TINYCHANGE
2018-01-19 18:14:58 +01:00
Kyle Meyer 3e1641ef0a Update copyright years 2018-01-07 00:27:54 -05:00
Paul Eggert ff0dcf52a5 Backport commit bc511a64f from Emacs
Prefer HTTPS to FTP and HTTP in documentation
bc511a64f6da9ab51acc7c8865e80c4a4cb655c2
Paul Eggert
Wed Sep 13 15:54:37 2017 -0700
2017-09-17 00:28:38 -04:00
Nicolas Goaziou b8df40eccc ob-shell: Fix handling list variables
* lisp/ob-shell.el (org-babel--variable-assignments:bash): Do not
  error when value is a list.

* testing/lisp/test-ob-shell.el (ob-shell/simple-list): New test.

Reported-by: Keith Amidon <camalot@picnicpark.org>
<http://permalink.gmane.org/gmane.emacs.orgmode/113920>
2017-06-10 00:06:24 +02:00
Kyle Meyer 713f785017 Update copyright years 2017-01-05 20:19:37 -05:00
Nicolas Goaziou 93f90c8412 ob-shell: Fix wrong variable assignment binding
* lisp/ob-shell.el (org-babel-shell-initialize): Provide bindings to
  handle variable assignments for all the supported shells.
(org-babel--variable-assignments:sh-generic):
(org-babel--variable-assignments:bash_array):
(org-babel--variable-assignments:bash_assoc):
(org-babel--variable-assignments:bash): Rename using an internal
naming scheme since they are not meant to be called directly from
"ob-core.el".
(org-babel-variable-assignments:shell): Apply renaming.

Reported-by: David Dynerman <emperordali@block-party.net>
<http://permalink.gmane.org/gmane.emacs.orgmode/111139>
2017-01-03 18:28:50 +01:00
Aaron Ecay 140aacbf2f Use ‘eq’ instead of ‘equal’ for symbols
* lisp/ob-C.el (org-babel-C-val-to-C-type):
* lisp/ob-core.el (org-babel-get-colnames):
(org-babel-disassemble-tables):
* lisp/ob-lua.el (org-babel-lua-var-to-lua):
(org-babel-lua-table-or-string):
* lisp/ob-python.el (org-babel-python-var-to-python):
(org-babel-python-table-or-string):
* lisp/ob-ruby.el (org-babel-ruby-var-to-ruby):
(org-babel-ruby-table-or-string):
* lisp/ob-shell.el (org-babel-sh-var-to-string):
* lisp/ob-sqlite.el (org-babel-sqlite-table-or-scalar):
* lisp/org-agenda.el (org-agenda-prepare-window):
(org-compile-prefix-format):
* lisp/org-bibtex.el (org-bibtex-headline):
* lisp/org-capture.el (org-capture):
* lisp/org-colview.el (org-columns-next-allowed-value):
* lisp/org-mhe.el (org-mhe-store-link):
(org-mhe-get-message-real-folder):
(org-mhe-get-message-folder):
(org-mhe-get-message-num):
(org-mhe-get-header):
(org-mhe-follow-link):
* lisp/org-table.el (org-define-lookup-function):
* lisp/org.el (format-spec):
* lisp/ox-odt.el (org-odt--translate-description-lists):
* lisp/ox-publish.el (org-publish-compare-directory-files):
Use `eq' instead of `equal' when comparing to symbols.
* lisp/org-timer.el (org-timer-set-mode-line):
* lisp/org-capture.el (org-capture-finalize):
Use `cl-case' instead of `(cond ((eq x 'foo) ...) ...)'.
2016-09-25 16:29:06 +01:00
Aaron Ecay 79650ffbbd Use assq instead of assoc for :keywords
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-J.el (org-babel-execute:J):
* lisp/ob-R.el (org-babel-edit-prep:R):
(org-babel-expand-body:R):
(org-babel-execute:R):
(org-babel-variable-assignments:R):
(org-babel-R-initiate-session):
* lisp/ob-abc.el (org-babel-execute:abc):
* lisp/ob-asymptote.el (org-babel-execute:asymptote):
* lisp/ob-awk.el (org-babel-execute:awk):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
(org-babel-execute:clojure):
* lisp/ob-core.el (org-babel-expand-body:generic):
(org-babel-load-in-session):
(org-babel-initiate-session):
(org-babel-open-src-block-result):
(org-babel-process-params):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
* lisp/ob-ditaa.el (org-babel-execute:ditaa):
* lisp/ob-dot.el (org-babel-execute:dot):
* lisp/ob-ebnf.el (org-babel-execute:ebnf):
* lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp):
(org-babel-execute:emacs-lisp):
* lisp/ob-exp.el (org-babel-exp-process-buffer):
(org-babel-exp-do-export):
(org-babel-exp-code):
* lisp/ob-forth.el (org-babel-execute:forth):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-gnuplot.el (org-babel-gnuplot-process-vars):
(org-babel-expand-body:gnuplot):
(org-babel-execute:gnuplot):
* lisp/ob-groovy.el (org-babel-execute:groovy):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-io.el (org-babel-execute:io):
* lisp/ob-java.el (org-babel-execute:java):
* lisp/ob-js.el (org-babel-execute:js):
* lisp/ob-latex.el (org-babel-execute:latex):
* lisp/ob-ledger.el (org-babel-execute:ledger):
* lisp/ob-lilypond.el (org-babel-lilypond-process-basic):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
(org-babel-execute:lisp):
* lisp/ob-lua.el (org-babel-execute:lua):
* lisp/ob-maxima.el (org-babel-execute:maxima):
* lisp/ob-mscgen.el (org-babel-execute:mscgen):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-execute:octave):
* lisp/ob-org.el (org-babel-execute:org):
* lisp/ob-perl.el (org-babel-execute:perl):
* lisp/ob-picolisp.el (org-babel-execute:picolisp):
* lisp/ob-plantuml.el (org-babel-execute:plantuml):
* lisp/ob-python.el (org-babel-execute:python):
* lisp/ob-ruby.el (org-babel-execute:ruby):
* lisp/ob-sass.el (org-babel-execute:sass):
* lisp/ob-scala.el (org-babel-execute:scala):
* lisp/ob-scheme.el (org-babel-execute:scheme):
* lisp/ob-screen.el (org-babel-execute:screen):
(org-babel-prep-session:screen):
* lisp/ob-shell.el (org-babel-execute:shell):
(org-babel-variable-assignments:shell):
(org-babel-sh-evaluate):
* lisp/ob-shen.el (org-babel-execute:shen):
* lisp/ob-sql.el (org-babel-execute:sql):
* lisp/ob-sqlite.el (org-babel-execute:sqlite):
* lisp/ob-tangle.el (org-babel-tangle):
(org-babel-tangle-single-block):
* lisp/org-src.el (org-src-associate-babel-session):
* lisp/org.el (org-next-link):
Use `assq' instead of `assoc' with :keyword keys.
2016-09-23 11:20:09 +01:00
Aaron Ecay 6b52bc6a21 Clean up string handling.
* lisp/org-compat.el (string-prefix-p, string-suffix-p):
Add compatibility definitions for 24.3.

* lisp/ob-R.el (org-babel-edit-prep:R):
* lisp/ob-core.el (org-babel-demarcate-block):
* lisp/ob-js.el (org-babel-js-read):
* lisp/ob-latex.el (org-babel-execute:latex):
* lisp/ob-ref.el (org-babel-ref-parse):
* lisp/ob-shell.el (org-babel-variable-assignments:shell):
* lisp/org-protocol.el (org-protocol-create):
* lisp/org-table.el (org-table-field-info):
* lisp/org.el (org-get-buffer-for-internal-link):
* lisp/ox-publish.el (org-publish-compare-directory-files):
* lisp/ox-texinfo.el (org-texinfo-template):
Use `string-{suffix,prefix}-p' instead of `string-match(-p)'.

* lisp/ob-python.el (org-babel-python-read-string):
Ditto, also use `substring' rather than `match-string'.

* lisp/org-table.el (org-table-copy-down):
(org-table-insert-hline, org-table-current-field-formula):
(org-table-get-formula): Use `string-match-p' instead of
`string-match'.
2016-08-24 16:05:54 +01:00
Nicolas Goaziou 0dc3811a7a ob-shell: Silence byte-compiler 2016-07-23 11:49:28 +02:00
Nicolas Goaziou 250304bd2e ob-shell: Make `org-babel-shell-initalize' a command
* lisp/ob-shell.el (org-babel-shell-initialize): Add `interactive.
2016-07-23 10:47:01 +02:00
Nicolas Goaziou 0f7df32711 ob-shell: Use cl-lib 2016-07-23 10:41:17 +02:00
Nicolas Goaziou 609c3b3c14 ob-shell: Improve `org-babel-shell-name' customization
* lisp/ob-shell.el (org-babel-shell-initialize): New function
(org-babel-shell-names): Properly update execute functions whenever the
variable is modified outside the Customize interface.
2016-07-23 10:34:37 +02:00
Nicolas Goaziou 4f63cfabb3 Deprecate `org-babel-trim' in favor of `org-trim'
* lisp/org.el (org-trim): Add optional argument.

* contrib/lisp/ob-mathematica.el (org-babel-execute:mathematica):
* contrib/lisp/org-bibtex-extras.el (obe-html-export-citations):
* contrib/lisp/org-mime.el (org-mime-compose):
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-calc.el (org-babel-execute:calc):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
* lisp/ob-core.el (org-babel-initiate-session):
(org-babel-parse-multiple-vars):
(org-babel-read-element):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
(org-babel-trim): Mark obsolete.
* lisp/ob-forth.el (org-babel-forth-session-execute):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-latex.el (org-babel-expand-body:latex):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-octave-evaluate-session):
* lisp/ob-python.el (org-babel-python-evaluate-external-process):
(org-babel-python-evaluate-session):
* lisp/ob-ref.el (org-babel-ref-split-args):
* lisp/ob-ruby.el (org-babel-ruby-evaluate):
* lisp/ob-shell.el (org-babel-sh-evaluate):
* lisp/ob-table.el (org-sbe):
* lisp/ob-tangle.el (org-babel-spec-to-string):
* lisp/org-bibtex.el (org-bibtex-get):
* testing/lisp/test-ob.el (test-ob/parse-header-args): Use `org-trim'
  instead of `org-babel-trim'.
2016-06-21 15:33:00 +02:00
Nicolas Goaziou f8eb0b30ea ob-shell: Fix "wrong type sequencep: function" error
* lisp/ob-shell.el (org-babel-shell-names): Fix error introduced when
  switching to lexical binding.
2016-06-20 22:12:02 +02:00
Nicolas Goaziou 2108f0c23a ob-shell: Use lexical binding
* lisp/ob-shell.el (org-babel-sh-initiate-session): Silence
  byte-compiler.
2016-06-20 14:58:32 +02:00
Kyle Meyer 4925d5be7b Merge branch 'maint' 2016-05-15 19:00:30 -04:00
Kyle Meyer 19cf68da90 Fix remaining declare-function issues
* lisp/ob-shell.el (org-babel-comint-in-buffer):
(org-babel-comint-with-output):
* lisp/org-table.el (org-export-create-backend):
* lisp/org.el (org-babel-do-in-edit-buffer): Indicate that FN is not a
defun.
* lisp/ob-tangle.el (org-string-nw-p):
* lisp/org-table.el (org-export-create-backend):
(org-export-data-with-backend):
(org-export-filter-apply-functions):
(org-export-first-sibling-p):
(org-export-get-backend):
(org-export-get-environment):
(org-export-install-filters):
(org-export-table-has-special-column-p):
(org-export-table-row-is-special-p): Correct source file name.
* lisp/ob-R.el (ess-wait-for-process):
* lisp/org-clock.el (calendar-iso-to-absolute):
* lisp/org-list.el (org-previous-line-empty-p):
* lisp/org-pcomplete.el (org-entry-properties):
* lisp/org-table.el (org-export-data-with-backend):
(org-export-get-environment):
* lisp/org.el (org-element-interpret-data): Correct argument list.
2016-05-15 18:59:20 -04:00
Kyle Meyer 6345de2d05 Merge branch 'maint' 2016-01-09 17:43:27 -05:00
Kyle Meyer 6bc48c5f41 Update copyright years 2016-01-09 17:12:03 -05:00
Aaron Ecay 0d000f5680 babel: small change in API.
* lisp/ob-core.el (org-babel--get-vars): New function.
(org-babel-get-header): Delete.
* lisp/ob-C.el (org-babel-C-expand-C):
(org-babel-C-expand-D):
* lisp/ob-R.el (org-babel-variable-assignments:R):
* lisp/ob-abc.el (org-babel-expand-body:abc):
* lisp/ob-asymptote.el (org-babel-variable-assignments:asymptote):
* lisp/ob-awk.el (org-babel-execute:awk):
* lisp/ob-calc.el (org-babel-execute:calc):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
* lisp/ob-dot.el (org-babel-expand-body:dot):
* lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp):
* lisp/ob-fortran.el (org-babel-expand-body:fortran):
(org-babel-fortran-ensure-main-wrap):
* lisp/ob-gnuplot.el (org-babel-gnuplot-process-vars):
* lisp/ob-haskell.el (org-babel-variable-assignments:haskell):
* lisp/ob-js.el (org-babel-variable-assignments:js):
* lisp/ob-latex.el (org-babel-expand-body:latex):
* lisp/ob-lilypond.el (org-babel-expand-body:lilypond):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
* lisp/ob-maxima.el (org-babel-maxima-expand):
* lisp/ob-ocaml.el (org-babel-variable-assignments:ocaml):
* lisp/ob-octave.el (org-babel-variable-assignments:octave):
* lisp/ob-org.el (org-babel-expand-body:org):
* lisp/ob-perl.el (org-babel-variable-assignments:perl):
* lisp/ob-picolisp.el (org-babel-expand-body:picolisp):
* lisp/ob-processing.el (org-babel-variable-assignments:processing):
* lisp/ob-python.el (org-babel-variable-assignments:python):
* lisp/ob-ruby.el (org-babel-variable-assignments:ruby):
* lisp/ob-scheme.el (org-babel-expand-body:scheme):
* lisp/ob-shell.el (org-babel-variable-assignments:shell):
* lisp/ob-shen.el (org-babel-expand-body:shen):
* lisp/ob-sql.el (org-babel-expand-body:sql):
* lisp/ob-sqlite.el (org-babel-expand-body:sqlite): Adapt to change.
* etc/ORG-NEWS: Document change.
2015-10-29 19:26:11 +00:00
Kyle Meyer 0839dc4322 Protect remaining apostrophes in docstrings
Protect apostrophes not covered by the last backport.  Convert
expressions like '(...)  to \\='(...)  and symbols written as 'name to
`name'.  (In addition to ensuring the correct display, the latter also
improves consistency with many Org docstrings.)

If these aren't protected, Emacs 25 may display them as curved quotes in
the help buffer, depending on the value of text-quoting-style.
2015-09-21 18:38:39 -04:00
Kyle Meyer 8d2c6af7ed Update remaining copyright years in lisp/ 2015-08-10 02:17:52 -04:00
Nicolas Goaziou 048f0e1a82 ob-shell: Add missing "sh" to "shell" conversions
* lisp/ob-shell.el (org-babel-default-header-args:shell): Renamed from
`org-babel-default-header-args:sh'.
(org-babel-variable-assignments:shell): Renamed from
`org-babel-variable-assignments:sh'.
(org-babel-prep-session:shell): Renamed from
`org-babel-prep-session:sh'.  Apply renaming.
(org-babel-load-session:shell): Renamed from
`org-babel-load-session:sh'.  Apply renaming.

(org-babel-execute:shell): Apply renaming.

Reported-by: Sebastien Vauban
<http://permalink.gmane.org/gmane.emacs.orgmode/98859>
2015-07-03 16:17:11 +02:00
Nicolas Goaziou 9290395405 Silence byte-compiler
* lisp/ob-shell.el (org-babel-sh-evaluate):
* lisp/org-clock.el (org-x11idle-exists-p): Do not use last
  `call-process-shell-command' arg.

* lisp/org-mouse.el (org-mouse-show-context-menu): Ignore
  `redisplay-dont-pause'.

* lisp/org.el (org-icompleting-read): Fix typo.  Small refactoring.
2015-04-22 09:51:52 +02:00
Aaron Ecay c4f34a69b5 babel: Remove functions which are never called.
* lisp/ob-awk.el (org-babel-awk-table-or-string):
* lisp/ob-shell.el (org-babel-sh-table-or-results): Remove.
2015-01-23 14:36:40 -05:00
Achim Gratz c478b57d4e Merge branch 'maint' 2014-09-19 11:53:46 +02:00
Achim Gratz 7d8523d9d1 ob-shell: compatibility fix for "Marker does not point anywhere" errors in Emacs 23
* lisp/ob-shell.el (org-babel-sh-initiate-session): After initiating a
  session, initialize the marker `comint-last-output-start' since it
  is going to be used by the ANSI color filter without further checks
  in Emacs 23 and throws an error.
2014-09-19 11:34:09 +02:00