Commit Graph

2077 Commits

Author SHA1 Message Date
Yasushi SHOJI 3a291b0f0e ox-publish.el: Add `org-html-publish-to-html' as the default publishing function
* lisp/org-macs.el (org-plist-delete-all): New function.

* lisp/ox-publish.el (org-publish-file): Add
`org-html-publish-to-html' as the default publishing function.

* testing/lisp/test-ox-publish.el (org-test-publish): Use
`org-plist-delete-all' to remove properties from the plist.

Reported-by: Christopher W. Ryan
See <https://list.orgmode.org/CAELBRWLgV-s6SGX=cevtN7iW8htwiLezR469T-cGMWE_6iX1+A@mail.gmail.com>
2021-09-29 09:14:43 +02:00
Jeremie Juste 51a60cd53f lisp/ob-R: Async evaluation in R
* lisp/ob-R.el (ob-session-async-R-indicator): Add constant
representing a prefix R to identity session.
(ob-session-async-org-babel-R-evaluate-session): New function to
evaluate R src block asynchrously.
(ob-session-async-R-value-callback): New function that calls back
the result of the asynchronous evaluation.
(org-babel-R-evaluate): Add `async' parameter and call
`ob-session-async-org-babel-R-evaluate-session' if `async'
parameter is present.
(org-babel-execute:R): Call `org-babel-comint-use-async' to check
if async is among `params' and add async parameter to
`org-babel-R-evaluate'.

* testing/lisp/test-ob-R.el: Add 7 more tests for async
evaluations, also taken from the `ob-session-async' package.

This is almost a carbon copy of Jack Kamm's `ob-session-async'.
The original source code can be found
https://github.com/jackkamm/ob-session-async.

Please refer to the following thread to trace back the discussion
on async evaluation in R:

https://list.orgmode.org/87eed9g9p6.fsf@gmail.com/
2021-09-28 18:22:12 +02:00
Max Nikulin 6300e0ebef test-org-protocol.el: Decode "+" to " " tests
testing/lisp/test-org-protocol.el
(test-org-protocol/org-protocol-store-link)
(test-org-protocol/org-protocol-capture): Cases to check that "+" is
decoded to space in query parameters (new style of URIs) but preserved
in path components (old style of org-protocol links).
2021-09-27 17:52:03 +02:00
Bastien 98fd6d5fd5 Remove references to deleted packages
* testing/lisp/test-ob-vala.el: Delete file.

* mk/default.mk (BTEST_OB_LANGUAGES):
* lisp/ox-man.el (org-man-source-highlight-langs):
* lisp/org.el (org-babel-load-languages): Remove references to
deleted packages.
2021-09-26 14:13:28 +02:00
Ihor Radchenko 54c2327f3a Allow :var header args to be assigned to cons cells
* lisp/ob-core.el (org-babel-disassemble-tables,
org-babel-gnuplot-process-vars): Use `proper-list-p' check instead of
`listp'.
(org-babel-disassemble-tables): Check list length before trying to
remove hline from a table assignment.
* testing/lisp/test-ob.el (test-ob/cons-cell-as-variable): Add the
test.
2021-09-26 10:21:20 +02:00
Ihor Radchenko d3d80c5948 Add test checking org-log-done specs
* testing/lisp/test-org.el (test-org/org-log-done): New test
2021-09-26 09:05:17 +02:00
Bastien 777c1c3cb5 Merge branch 'bugfix' 2021-09-25 18:02:19 +02:00
Max Nikulin ec7c16a060 ox-latex: Allow percent sign in 'src-block' caption
* lisp/ox-latex.el (org-latex-src-block): Prevent leak of percent sign
from caption to `format' first argument causing export failure due to
insufficient argument number.  The fix covers only the case of verbatim
environment.
* testing/lisp/test-ox.el
(test-org-export/latex-src-block-verbatim-caption): New test for src
block LaTeX export with cases of various formatting of caption and
verbatim environment.  Check that percent signs in caption and source
block body do not lead to errors.

Reported-by: Charest, Luc <charest.luc@hydroquebec.com>
<https://lists.gnu.org/archive/html/emacs-orgmode/2021-08/msg00017.html>
2021-09-25 18:02:08 +02:00
Ihor Radchenko a3c912cb29 Fix duplicate logbook entry for repeated tasks
* lisp/org.el (org-add-log-setup): Always run `org-add-log-note' via
`post-command-hook'.  Otherwise, there is no way to know if a note was
requested for `this-command'.  Running `org-add-log-note' directly
would, for example, break `org-auto-repeat-maybe' as reported in [1].

* lisp/org-agenda.el (org-agenda-todo): Avoid reintroducing the bug
fixed in c670379adf.

* testing/lisp/test-org.el: Add test checking the reported bug.

[1] https://orgmode.org/list/CAOn=hbcaW1R6vtun-E2r4LS=j3dp=VjqmjGtzy8UC1SyPArKbA@mail.gmail.com
2021-09-25 17:23:53 +02:00
Pedro Bruel bf1c4c7575 Include support for evaluating julia code
* lisp/ob-julia.el: included from org-contrib
* testing/lisp/test-ob-julia.el: start adapting from testing/lisp/test-ob-python.el
2021-09-25 16:00:02 +02:00
Marco Wahl 069bcba529 org: Fix functionality of org-insert-heading
* lisp/org.el (org-insert-heading): Fix insertion of headings when
  point is before any heading in the case of "respect content" insertion.

Kudos to Victor Stoichita. https://orgmode.org/list/87lf4594t3.fsf@svictor.net/
2021-09-18 14:54:09 +02:00
Nicolas Goaziou c839849aba footnote: Allow inserting footnotes at the end of table cells
* lisp/org-footnote.el (org-footnote--allow-reference-p): Allow
inserting footnotes at the end of table cells.
* testing/lisp/test-org-footnote.el (test-org-footnote/new): Add test.
2021-07-29 21:15:11 +02:00
Nicolas Goaziou 7ea9099725 oc: Allow inserting citations in table cells (part 2)
* lisp/oc.el (org-cite--allowed-p): Allow inserting a citation after
two or more spaces at the end of a table cell.
* testing/lisp/test-oc.el (test-org-cite/insert-capability): Add
tests.
2021-07-29 21:13:01 +02:00
Nicolas Goaziou 78c450247b oc: Allow inserting citations in captions
* lisp/oc.el (org-cite--allowed-p): Allow inserting citations in captions.
* testing/lisp/test-oc.el (test-org-cite/insert-capability): Add test.
2021-07-28 11:11:46 +02:00
Nicolas Goaziou af0fcb6833 element: Allow citations in table cells
* lisp/org-element.el (org-element-object-restrictions): Allow
citations in table cells.
* testing/lisp/test-org-element.el (test-org-element/citation-parser):
Add test.  Remove outdated test.
2021-07-28 10:32:29 +02:00
Nicolas Goaziou e844a6fd41 oc: Add Org Cite library
* lisp/oc.el: New file.
* testing/lisp/test-oc.el: New file.
2021-07-09 08:47:14 +02:00
Nicolas Goaziou 4c646a6bde ox: Introduce "raw" pseudo objects
* lisp/ox.el (org-export-raw-string): New function
(org-export-data):
(org-export-with-backend): React to raw objects.
* testing/lisp/test-ox.el (test-org-export/raw-string): New test.

A raw object is a pseudo-object (i.e., special object type that exists
only during export) with the property of being exported as-is, with no
processing from an export back-end.

It is particularly useful to add contents to, or pre-process objects
from, a parse tree.
2021-07-09 08:47:14 +02:00
Nicolas Goaziou fed07be5b8 element: Add citation support
* lisp/org-element.el (org-element-citation-key-re):
(org-element-citation-prefix-re): New variables.
(org-element--set-regexps): Set `org-element--object-regexp' so it
finds citations.
(org-element-all-objects): Add citation and citation-reference
objects.
(org-element-recursive-objects): Add citation object.
(org-element-object-restrictions): Add citation and citation-reference
to restrictions.
(org-element-secondary-value-alist): citation and citation references
can hold secondary strings.
(org-element-citation-parser):
(org-element-citation-interpreter):
(org-element-citation-reference-parser):
(org-element-citation-reference-interpreter): New functions.
(org-element--object-lex): Parse citations and citations references.
* testing/lisp/test-org-element.el (test-org-element/citation-parser):
(test-org-element/citation-reference-parser):
(test-org-element/citation-interpreter): New tests.

This patch adds support for [cite:@key], [cite:pre @key post]
[cite:global prefix; pre @key1 post; pre @key2 post; global suffix]
objects along with their [cite/style: ...] counterparts.
2021-07-09 08:47:14 +02:00
Allen Li 622f9fa76c org: Use crm for completing tags
* lisp/org-capture.el (org-capture-fill-template): Changed to use
completing-read-multiple.
* lisp/org.el (org-set-tags-command): Changed to use
completing-read-multiple.
(org-change-tag-in-region): Changed to use a simple completion table.
* testing/lisp/test-org.el (test-org/set-tags-command): Fixed tests.

Change various places which use `completing-read' to read tags using a
custom completion function to instead use `completing-read-multiple'
with a completion table instead.

This makes tab completion play better with alternative completion
frameworks such as vertico, selectrum, etc.

`org-change-tag-in-region' only reads a single tag, so it is changed
to use a completion table with `completing-read'.  This also makes it
play better with alternative completion frameworks.

Note that there is still one use for `org-tags-completion-function',
which is for completing tag matches.  Completing tag matches is
different from completing lists of tags since the separators (+, -,
etc) have semantic meaning.  This commit does not address that use
case.
2021-07-09 08:44:32 +02:00
Nicolas Goaziou dce8b3f254 Merge branch 'maint' 2021-05-20 15:45:45 +02:00
Nicolas Goaziou 13c78a5900 footnote: Allow new footnotes in empty cells
* lisp/org-footnote.el (org-footnote--allow-reference-p): allow
inserting new footnotes in empty cells.
* testing/lisp/test-org-footnote.el (test-org-footnote/new): Add
tests.

Reported-by: Uwe Brauer <oub@mat.ucm.es>
<http://lists.gnu.org/r/emacs-orgmode/2021-05/msg00940.html>
2021-05-20 15:44:27 +02:00
Jack Kamm 53fd5b774e ob-comint.el, ob-python.el: Async session evaluation
Adds functionality to ob-comint.el to implement async session eval on
a per-language basis.  Adds a reference implementation for ob-python.

* lisp/ob-comint.el (org-babel-comint-with-output): Remove comment.
(org-babel-comint-async-indicator, org-babel-comint-async-buffers,
org-babel-comint-async-file-callback,
org-babel-comint-async-chunk-callback,
org-babel-comint-async-dangling): Add buffer-local variables used for
async comint evaluation.
(org-babel-comint-use-async): Add function to determine whether block
should be evaluated asynchronously.
(org-babel-comint-async-filter): Add filter function to attach to
comint-output-filter-functions for babel async eval.
(org-babel-comint-async-register): Add function to setup buffer
variables and hooks for session eval.
(org-babel-comint-async-delete-dangling-and-eval): Add helper function
for async session eval.

* lisp/ob-python.el (org-babel-execute:python): Check for async header
argument.
(org-babel-python-evaluate): Check whether to use async evaluation.
(org-babel-python-async-indicator): Add constant for indicating the
start/end of async evaluations.
(org-babel-python-async-evaluate-session): Add function for Python
async eval.

*
testing/lisp/test-ob-python.el (test-ob-python/async-simple-session-output):
Unit test for Python async session eval.
(test-ob-python/async-named-output): Unit test that Python async eval
can replace named output.
(test-ob-python/async-output-drawer): Unit test that Python async eval
works with drawer results.
2021-05-18 09:13:28 -07:00
Bastien 4362b93018 Merge branch 'maint' 2021-05-16 10:36:42 +02:00
Nicolas Goaziou 8846ea71fa element: Fix drawer parsing
* lisp/org-element.el (org-element-drawer-parser): A single ":END:"
line should not be recognized as a drawer.
* testing/lisp/test-org-element.el (test-org-element/drawer-parser):
Add test.

Reported-by: Ihor Radchenko <yantar92@gmail.com>
<http://lists.gnu.org/r/emacs-orgmode/2021-05/msg00819.html>
2021-05-16 10:14:54 +02:00
Kévin Le Gouguec f0447de941 Set org-adapt-indentation explicitly in some tests
* testing/lisp/test-org.el (test-org/indent-line)
(test-org/indent-region): Make sure `org-adapt-indentation' is
consistent with expected results.
2021-05-15 16:13:49 +02:00
Kévin Le Gouguec b183315e16 Set org-adapt-indentation explicitly in some tests
* testing/lisp/test-org.el (test-org/with-electric-indent)
(test-org/without-electric-indent): Make sure
`org-adapt-indentation' is consistent with expected results.
2021-05-15 16:13:49 +02:00
Ihor Radchenko 3f59ea981c Add a test for known bug in org-element-cache
* testing/lisp/test-org-element.el (test-org-element/cache-bugs): A
new test documenting a known bug:

1. Create initial file like:

P0

  P1
  | a | b |
<point>| c | d |

Note that second line of the table is not indented.  Now,
org-element-at-point returns table-row.

2. Modify the file to test org-element-cache

P0

- item

  P1
  | a | b |
<point>| c | d |

Now, the first (indented) row of the table belongs to item.  The
second row should be an individual table and org-element-at-point
returns table.
2021-05-15 16:13:49 +02:00
Ihor Radchenko f318cd6c40 Fix test-org-element/cache "Preserve local structures when re-parenting."
* testing/lisp/test-org-element.el (test-org-element/cache): Add
spaces to make the "abcd" table a single table.  The old version uses
example org text with two tables and was passing because of another
bug in org-element-cache.  Testing the old version with
org-element-use-cache set to nil would yield error, while it should
not.
2021-05-15 16:13:49 +02:00
Ihor Radchenko 7dcb1afb69 Improve org-link-plain-re
* lisp/ol.el (org-link-make-regexps): Allow URLs with up to two
levels of nested brackets.

* lisp/org.el (org-link-plain-re): Update docstring.

* testing/lisp/test-ol.el: Add tests for the plain link regular
expression.

(org-link-plain-re): Update docstring.  Now,

Now, URLs like [1] can be matched.  The new regexp is based on [2].
The docstring of `org-link-plain-re'  explicitly mentions that the
regexp must contain groups for the link type and the path.

[1] https://doi.org/10.1016/0160-791x(79)90023-x
[2] https://daringfireball.net/2010/07/improved_regex_for_matching_urls
2021-05-15 16:13:49 +02:00
Kévin Le Gouguec 4764a2fbf9 Set org-adapt-indentation explicitly in some tests
* testing/lisp/test-org.el (test-org/indent-line)
(test-org/indent-region): Make sure `org-adapt-indentation' is
consistent with expected results.
2021-05-15 14:45:23 +02:00
Kévin Le Gouguec d85f4158e2 Set org-adapt-indentation explicitly in some tests
* testing/lisp/test-org.el (test-org/with-electric-indent)
(test-org/without-electric-indent): Make sure
`org-adapt-indentation' is consistent with expected results.
2021-05-15 14:45:21 +02:00
Ihor Radchenko 6ab5299e5b Fix test-org-element/cache "Preserve local structures when re-parenting."
* testing/lisp/test-org-element.el (test-org-element/cache): Add
spaces to make the "abcd" table a single table.  The old version uses
example org text with two tables and was passing because of another
bug in org-element-cache.  Testing the old version with
org-element-use-cache set to nil would yield error, while it should
not.
2021-05-15 13:51:02 +02:00
Ihor Radchenko f313b81841 Improve org-link-plain-re
* lisp/ol.el (org-link-make-regexps): Allow URLs with up to two
levels of nested brackets.

* lisp/org.el (org-link-plain-re): Update docstring.

* testing/lisp/test-ol.el: Add tests for the plain link regular
expression.

(org-link-plain-re): Update docstring.  Now,

Now, URLs like [1] can be matched.  The new regexp is based on [2].
The docstring of `org-link-plain-re'  explicitly mentions that the
regexp must contain groups for the link type and the path.

[1] https://doi.org/10.1016/0160-791x(79)90023-x
[2] https://daringfireball.net/2010/07/improved_regex_for_matching_urls
2021-05-15 10:33:23 +02:00
Jeremie Juste 9014577df2 test-ob-R.el: add tests for how NA values are printed
* testing/lisp/test-ob-R.el (ert-deftest test-ob-r/NA-blank): new test
for :results value. Make sure that NA values in R data.frames are
empty string instead of nil previously

see https://orgmode.org/list/87pn1dufm2.fsf@gmail.com/
2021-05-03 00:29:09 +02:00
Jeremie Juste c0338142b7 test-ob-R.el: add tests for output with substrings matching prompt
* testing/lisp/test-ob-R.el (test-ob-r/output-with-<>): new test for output
  angle brackets
 (test-ob-R/output-nonprinted): New test for output results that aren't
explicitly printed.  (Here all the lines are expected to be printed
not just the last one)

Patch suggested by Jack Kamm:
https://orgmode.org/list/87h7slgbi5.fsf@gmail.com/
2021-05-03 00:18:33 +02:00
Bastien 379e22bfcc Merge branch 'maint' 2021-05-02 11:06:46 +02:00
Ihor Radchenko 0e7153e63d org-test: Fix wrong-numbre-of-arguments error on master+native-comp
* testing/org-test.el (org-test-at-time): Use correct number of
arguments in 'decode-time cl-letf binding. `decode-time' accepts up to
3 arguments on master.

The wrong-numbre-of-arguments error is raised on Emacs master
configured with native-comp support when running make test on Org mode
master.  Native-comp modifies function calls with optional arguments
in the way that omitted arguments are still provided as `nil'.  For
example, `decode-time' called as (decode-time time) in lisp source may
be compiled into (decode-time time nil nil) call by native-compiler.
If redefined `decode-time' does not accept 3 arguments, it result in
error.

See Emacs bug#48133.
2021-05-02 11:06:32 +02:00
Sébastien Miquel a2cb9b853d ob-tangle.el: Improve tangling
* lisp/ob-tangle.el (org-babel-tangle-collect-blocks): Group
collected blocks by tangled file name.
(org-babel-tangle): Avoid quadratic behavior in number of blocks and
set modes before writing to file.
* testing/lisp/test-ob-tangle.el (ob-tangle/block-order): Update test.
2021-05-01 22:30:42 +02:00
Bastien Guerry 047fa8c319 Merge branch 'maint' 2021-04-28 09:23:29 +02:00
Maxim Nikulin 3dbeb677e0 test-org-protocol.el: Add expected failures for file:/// URLs
* testing/lisp/test-org-protocol.el
(test-org-protocol/org-protocol-store-link-file,
test-org-protocol/org-protocol-capture-file): Add tests to document
that existing calls to `org-protocol-sanitize-uri' could make passed
URLs invalid by changing number of slashes after scheme.

Till a fix of the problem the new tests are marked as expected failures.

Unless a relatively recent commit 5748615c48, I would believe that
`org-protocol-sanitize-uri' was added by mistake to the initial
implementation.  Capture URLs are anyway escaped with percent encoding.
2021-04-28 09:21:06 +02:00
Maxim Nikulin 5e8f039aaa test-org-protocol.el: Fix the case for parse parameters with complex argument
* testing/lisp/test-org-protocol.el
(test-org-protocol/org-protocol-parse-parameters): Specify that the case
simulating real life capture uses new style parameters string
to prevent test failure.

It looks like a typo survived since addition of this case in 2216f4d2c7.
2021-04-28 09:11:05 +02:00
Cheong Yiu Fung a1184f7d61 Add `ancestors-full' visibility setup to `org-show-context-detail'
* lisp/org.el(org-show-context-detail): Add `ancestors-full' visibility setup.
(org-show-set-visibility): Update accordingly.
* testing/lisp/test-org.el: Add tests.
2021-04-27 22:26:29 +02:00
Bastien Guerry 31d48755bf Merge branch 'maint' 2021-04-27 09:43:11 +02:00
Bastien Guerry 13a1a4fb96 Be more consistent about treating tags as case-sensitive
* lisp/org-agenda.el (org-agenda-finalize):
(org-agenda-format-item): Do not downcase tags.
(org-downcase-keep-props): Remove unused function.
(org-agenda-filter-expand-tags): Do not case-fold search.

* lisp/org.el (org-tags-expand): Document `downcased' argument as
obsolete and do not allow to expand downcased tags.

* testing/lisp/test-org.el (test-org/tags-expand): Remove test for
downcased tags expansion.

* doc/org-manual.org (TODO keywords, tags, properties, etc.):
Suggest that user-defined are usually lowercase, but don't make it
a requirement.

Reported-by: David Masterson <dsmasterson92630@outlook.com>
Link: https://orgmode.org/list/SJ0PR03MB5455D8D0C4F71AA495A9ABF79B709@SJ0PR03MB5455.namprd03.prod.outlook.com/
2021-04-27 09:41:26 +02:00
Nicolas Goaziou 9402aaebe7 Merge branch 'maint' 2021-04-19 18:19:29 +02:00
Nicolas Goaziou bc3ed23d16 element: Interpret :post-blank property in strings
* lisp/org-element.el (org-element-interpret-data):
Interpret :post-blank property in strings.
* testing/lisp/test-org-element.el (test-org-element/interpret-data):
Add test.
2021-04-19 18:17:55 +02:00
Nicolas Goaziou 628bb4f324 lint: Improve checks for internal macros
* lisp/org-lint.el (org-lint-invalid-macro-argument-and-template): Add
arity checks for internal macros.
* testing/lisp/test-org-lint.el (test-org-lint/invalid-macro-argument-and-template):
Add tests.
2021-04-19 02:06:01 +02:00
Nicolas Goaziou 4941444f45 Merge branch 'maint' 2021-04-13 09:56:16 +02:00
Nicolas Goaziou bcc1b0f1bb ob-exp: Do not comma-escape inline source code
* lisp/ob-exp.el (org-babel-exp-code): Do not comma-escape inline
source code.
* testing/lisp/test-ob-exp.el (ob-exp/exports-inline-code): Add test.
2021-04-13 09:55:29 +02:00
Nicolas Goaziou 5d5d102254 Revert "element: Un-escape code in inline source blocks"
This reverts commit 4056e11ddc.

We shouldn't code escape inline source blocks, as escaping can be
inlined any time, at which point escape character is no longer treated
specially. E.g.,

    src_c{a
    ,* 2}

may become

    src_c{a ,* a}

where the comma is no longer an escape character.
2021-04-13 09:47:09 +02:00